Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6363g00002 ATGGTGTCGCTGAAACTGCAAAAGCGGCTGGCCGCAAGCGTGCTCAAGTGTGGAAGAGGAAAGGTTTGGCTTGACCCCAATGAAGTCAACGAAATCTCCATGGCCAATTCGAGGCAAAACGTGAGAAAGTTGGTTAAGGATGGGTTTATCATCAGGAAGCCAACCAAGATTCACTCCCGATCGCGTGCTCGAAGGATGAAAGAGGCAAAGAGGAAGGGCCGTCACTCCGGATATGGTAAGCGCAAGGGTACAAGGGAGGCAAGGCTTCCCACCAAGATACTTTGGATGAGAAGGATGCGTGTGCTCAGACGGTTGCTCCGTAAGTACCGGGAATCAAAGAAAATTGACAAACACATGTACCATGATATGTACATGAAAGTGAAAGGTAATGTTTTCAAGAACAAGAGAGTCTTGATGGAGAGCATTCACAAGTCCAAGGCTGAGAAGGCAAGAGAGAAGACGTTGTCTGATCAGTTTGAGGCAAAGCGTGCAAAGAACAAGGCAAGCAGGGAAAGGAAACTTGCTCGCAGGGAGGAGCGCTTAGCCCAAGGTCCTGTTGATAAGACACCTACAGCACCCAGTGCCCCAGCACCCCAGTCTGCCCAAGCGCCAAAGAAATCCAAGAAGTGA 630 0.4968 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKLARREERLAQGPVDKTPTAPSAPAPQSAQAPKKSKK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6363g00002 209 FunFam Ribosomal protein L19 1 56 - -
Mupr6363g00002 209 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mupr6363g00002 209 PANTHER 60S RIBOSOMAL PROTEIN L19 1 188 IPR039547 GO:0003723|GO:0003735|GO:0022625
Mupr6363g00002 209 MobiDBLite consensus disorder prediction 144 209 - -
Mupr6363g00002 209 MobiDBLite consensus disorder prediction 144 184 - -
Mupr6363g00002 209 MobiDBLite consensus disorder prediction 57 85 - -
Mupr6363g00002 209 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Mupr6363g00002 209 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mupr6363g00002 209 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Mupr6363g00002 209 Gene3D - 57 188 - -
Mupr6363g00002 209 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Mupr6363g00002 209 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Mupr6363g00002 209 FunFam Ribosomal protein L19 57 191 - -
Mupr6363g00002 209 Coils Coil 161 181 - -
Mupr6363g00002 209 MobiDBLite consensus disorder prediction 57 79 - -
Mupr6363g00002 209 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6363g00002 Mupr-Chr6363 14059 15965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6363g00002 1 209 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 84.689 9.12e-127 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6363g00002 K02885 - vvi:100267158 350.132