LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr6363g00001	ATGGTGGAAAGAAGGAGAAAGCCTCTGATTCTGTGTTCCACCAAACATGTCATCAATTCCACTGCCCCAACCAACAACCTCTTCCACCGTGAATCTTCTCCCACCTTCCACTTACCGGTTGGGATTCTCCGATTCTCAAACCTCGCTAATCCCTCTTTCGACCACTCCTCGCTCCTCGCCCTCTCCACTAGTCTTCTCAAAACCCTTTCTATCACTTCAGGCTCACCGGTTCTAGTCAAGAATGTTGATACCAACACACAGAAAATTGCAGTGGCTGTTGCTCTTGATCCACCAGGCACCACCACTAACGTAGACTCACCCTCTTCTTCTTCTTCTTCTTCTTCGCGAATAATGCTTGTTTTTCCTTCTTGTGATTTCCCTCGCAGTGGTGTCCCCGTCTTAGATGATCAAATCGCGTTTTTATCTCCTCTTTTAGCCTTTAACCTTAACTTGCACGTGGCGTGCTTAAAATCCGTTCTTCACCACGGGCAAGACGCTTTGGCTTCTTATTTCGGAAGGGGTGATGAGGATGCTGCTAAAACCACTGTGGATTCTGTCATCAACGTGGAATTGGAACCGCTTGCTCAGCCTCCGAAATTTGTCTCTCTTCTGAGGGTTTCTTTTGTGAAGATACCAGAATGTGGCATCCTAGAATCCATTAAAGCAAGTTCAGCTATTGAGTCACAAGAGCGGCAAGACATGATCGACATGGCATTGCAAAAGTACTTTGAAGTTGATAGATATTTGTCCAAGGGAGATGTATTTGGAATTAGCATAAGTTGGAACTGCAATTCCCCCATTTGCATTCCTTGCAATCAAAGAACATTGAATAAAAATGACAACCTTATCTGTTTCAAGGTTGTTGGTATGGAACCATCAGATGAACCGGTTTTCCGTGTCAATAACATCTTAACTGCTCTCGTGCTGGTAGGGAGTTCTCCATCCGCACTCCCTCCAGATTTGTTGATTGGTGTACCTGAAGGACCTGTGCCTTTGCAAGGGGACACTGTCGACATCTTGGCTTCAATACTTACTCCATCTTTTTGTCCATCGGTGCTTTCTTCCAAGTTTAGAGTTTCAGTTCTGTTGTATGGCTTGGCAGGTGTTGGGAAAAGGACTGTTGTCAGATATGTTGCTCGTAGACTAGGCCTGCATGTGGTGGAATACAACTGTCATGATCTAATGGTGTCTGATAGAACATCTGTTGCTTTAGCGCAAGCTTTCAAGACGGCTCGAAGATACTCACCAGCAATACTTCTTCTTCGTCATTTTGATGTCTTTCGAGATTCGCAATCGCCTGAGGGTCCAGCACCTGACCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTCGGAAATTCACCGAGCCAGTCAGTGAACATGGTGATAGTAATATCCTGGGGAAGTCAAATGGTGAATCTAATTGCAAAGATATTTACCTTTACAGCATGTTGGTGAAGGTGGAGAAGAATGCTGAAAAGACAAGTGGGCATCAGGTCCTGTTGATTGCTGCTGCTGACAGTTCAGAAGGTCTGCCTTCAACTATCAGACGCTGTTTTAGCCATGAAATAAGCATGGGACCTTTGACAGAAGAGCAAAGGGCCGAAATGCTATTCCAGTCACTGCAAAGTGTTTCCGAACTCCTCTCTAACACTGATTCAGAAACTTTAGTAAAAGAAATAGTTGGACAGACATCTGGCTACATGCCAAGGGATATGTGTGCTTTAGTTGCTGATGCTAGTGCCAACTTATTTCTCAAAAACAATGCTAAAGTAGACAAAGATGTGCTTGATGATGTAGATAGTTCTTCTAGTTCCAAGATGGCAGAGGACAACAATCATGGGAAAGTTTCACCTCAGATTCCTGGGAGAGAAGACTTATTGAATGCTTTGGAACGATCAAAGAAAAGAAATGCATCTGCATTGGGAACTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTCAAAAAGTCAATCCTGGATACTGTTCAGTTACCTCTCCTGCATAAAGATCTATTTTCATCTGGATTACGTAAACGATCTGGTGTTCTTTTGTATGGTCCCCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACAGAATGTTCCTTAAATTTTCTTAGTGTGAAAGGTCCTGAGCTGATCAACATGTACATTGGAGAGTCTGAGAAGAATGTACGAGACATTTTCCAGAAGGCCAGATCAGCACGCCCATGTGTCATCTTCTTTGATGAGCTAGATTCTCTTGCACCAGCTCGGGGCGCTTCTGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGACGGCTTAAGTGATTCAACACAGGATCTGTTTATTATAGGTGCAAGTAATAGACCAGATTTGATAGACCCAGCACTTCTGCGCCCGGGTCGATTTGATAAACTGCTATATGTTGGAGTTAACTCTGATGCATCTTACAGGGAGAGGGTCTTGAAAGCTCTTACCCGAAAGTTCAAATTGCATGAAGATGTCTCACTTTACTCCATAGCAAAAAAATGTCCTCCAAACTTCACTGGTGCAGACATGTATGCTTTGTGTGCAGATGCTTGGTTCCATGCTGCAAAGCGCAAAGTTTCGAGTGCAAATCCAGAGTCTTCCAGCCAAGATAATGAAGCAGATTCTGTTGTCGTCGAATACAATGATTTTGTCCAGGTCTTAGAACAGCTGTCGCCTTCCCTCTCCATGACTGAGCTTAAGAAGTACGAGCAACTGAGAGATCAGTTTGAAGGCACCTCTAAATGA	2808	0.4387	MVERRRKPLILCSTKHVINSTAPTNNLFHRESSPTFHLPVGILRFSNLANPSFDHSSLLALSTSLLKTLSITSGSPVLVKNVDTNTQKIAVAVALDPPGTTTNVDSPSSSSSSSSRIMLVFPSCDFPRSGVPVLDDQIAFLSPLLAFNLNLHVACLKSVLHHGQDALASYFGRGDEDAAKTTVDSVINVELEPLAQPPKFVSLLRVSFVKIPECGILESIKASSAIESQERQDMIDMALQKYFEVDRYLSKGDVFGISISWNCNSPICIPCNQRTLNKNDNLICFKVVGMEPSDEPVFRVNNILTALVLVGSSPSALPPDLLIGVPEGPVPLQGDTVDILASILTPSFCPSVLSSKFRVSVLLYGLAGVGKRTVVRYVARRLGLHVVEYNCHDLMVSDRTSVALAQAFKTARRYSPAILLLRHFDVFRDSQSPEGPAPDQRGNTSEVASVIRKFTEPVSEHGDSNILGKSNGESNCKDIYLYSMLVKVEKNAEKTSGHQVLLIAAADSSEGLPSTIRRCFSHEISMGPLTEEQRAEMLFQSLQSVSELLSNTDSETLVKEIVGQTSGYMPRDMCALVADASANLFLKNNAKVDKDVLDDVDSSSSSKMAEDNNHGKVSPQIPGREDLLNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVSSANPESSSQDNEADSVVVEYNDFVQVLEQLSPSLSMTELKKYEQLRDQFEGTSK	935

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr6363g00001	935	FunFam	Peroxisome biogenesis protein 6	823	909	-	-
	Mupr6363g00001	935	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	327	599	IPR027417	-
	Mupr6363g00001	935	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	648	929	IPR027417	-
	Mupr6363g00001	935	Pfam	ATPase family associated with various cellular activities (AAA)	689	821	IPR003959	GO:0005524\|GO:0016887
	Mupr6363g00001	935	Pfam	ATPase family associated with various cellular activities (AAA)	361	525	IPR003959	GO:0005524\|GO:0016887
	Mupr6363g00001	935	CDD	RecA-like_PEX6_r2	661	820	IPR047533	-
	Mupr6363g00001	935	FunFam	Peroxisomal biogenesis factor 6	647	836	-	-
	Mupr6363g00001	935	ProSitePatterns	AAA-protein family signature.	792	810	IPR003960	GO:0005524\|GO:0016887
	Mupr6363g00001	935	Gene3D	-	338	550	IPR027417	-
	Mupr6363g00001	935	MobiDBLite	consensus disorder prediction	599	623	-	-
	Mupr6363g00001	935	Gene3D	-	647	924	IPR027417	-
	Mupr6363g00001	935	PANTHER	AAA-FAMILY ATPASE	57	932	-	-
	Mupr6363g00001	935	SMART	AAA_5	357	530	IPR003593	GO:0016887
	Mupr6363g00001	935	SMART	AAA_5	685	825	IPR003593	GO:0016887
	Mupr6363g00001	935	FunFam	Peroxisome biogenesis protein 6	330	527	-	-
	Mupr6363g00001	935	Gene3D	-	823	909	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr6363g00001	Mupr-Chr6363	2067	8997	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr6363g00001	646	931	Calmodulin-binding Proteins	AT3G56690	43.206	1.47e-62	228

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr6363g00001	K13339		-	gmx:100820183	1604.73