LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr6354g00005	ATGTACAACCACATGTGTGTCTTGGTGGTGTTATGTTTCCCCGTTTTGTTGAATGCCCTTCCCCCCGACAAAGGTGGTGATGGCGAGTCGTTGATGTTGGGGTGTGGGTTGGGTGAAGGTGGTGGCAAAGACAGTGATGGAAGACAATGGACTCCCGATAACAAGTACCTCTCAGGAGGCAATTCCATCACATCCAGAGCCTCTTTCCAAGACCCTTCGCTTTTGTCTGAGGTTCCATACATGACGTCACGAGTTTTTACGTCTGAAGCAACCTACAACTTCCCTATTCAAGCCAACAAACGCTATTGGCTCAGGCTCCATTTTTACCCCTCCGTTTATGGCACCTTCAACCCCCCAAATTCATATTTCTCCGTCATAGCAAACGGCATTACGCTTCTTTCCAATTTCAGTGCCTCAATCACATGTCAGGCCCTCTCACAAGCCTACCTCGATAGAGAGTACTCCCTCGCTCCTTTTGATTTAGACACTCTCACTGTTACCTTTAAGCCTTCCGAGAAACATAACGGGGCTTTCGCTTTTGTAAACGGAATTCAGCTCGTCCAAATGCCAGATATGTTCGATTCGGCTGCTTTGGTGGGGTTCGCTAGCCAAACTGTGGATACTAAAACTTTGCATTTACAAACCATGTTCAGATTGAATGTTGGTGGGCAATACATATCTCCAGCACAAGATTCTGGTCTAAGCAGGATGTGGTACGATGATACACCTTATCTATATGGTGCAGCCGCTGGTGTCACCAACCAAGCTACCCAGGATGTCAAAATTGACTACAAAACCGTGCCACAGTACATTGCTCCTCCTGATGTGTACTCCACTTCGCGGTCCATGGGCACCAATAAGGATGTTAACATGGGCTTCAATCTCACGTGGATGTTCCAAGTTGACCCTAACTCCATGTACCTTACCAGGTTGCATTTTTGTGACTACTACTATTCTAAAGTAAACGAGATTGTTTTCAAAATCTTCATCAACAACCACACGGCGAAGGCTGATGCTGATGTTATTGCGTGGACGGGAGGTAAAGGAGTGCCAACTTACAAGGATTATGTAATATATGCCCAAGATAGGCCAGGTGATGATCTACTATGGGTTGCTTTGCATCCTTCAACTGAGTCAAGGCCAGAATTTTATGATGCAATTCTTAATGGGATTGAGGTATTCAAGCTCAATGACACAAACTTATCTGGACCCAATCCTCAACCTTCTGCCATGTTGATTAAACACGAGGAGATGGAAAGGACTTTCCAAGAAAGTAGAAATAGTAGTAAAAGGACTTTTGTTATTGGCAGTGCTGCTGGGGGTGCTGCAGGCTTTGCCTTAGTGGCTGCAATATGTGTTGTTGTTCATCGCAAAAAGAGGAAGAGAGCTCCAGGATCATACAGTGCATCAAGTTGGCTACCTATATATGGGAATTCAAACACAACAGGCACCAAATCCACAGTGTCAGGGAAGAGTGTAGGCAGTGGCAACATATCAGCCATGGCTCAAGGATTGTGTCGCTACTTCTCCTTACAAGAGATGATACAAGCAACCAAGAATTTTGATGAGGCCAATGTGATAGGGGTGGGAGGGTTTGGGAAGGTTTATAAGGGTGTTATTGAAAATGGGTTTAAAGTGGCAATTAAAAAATCGAACCCACAATCAGAACAAGGAGTAAATGAGTTCCAGACTGAGATTGAGATGTTGTCAAAGTTAAGACACAAGCACTTGGTGTCGTTGATTGGTTTCTGCGAGGAGAATGATGAGATGTGTCTGGTTTATGACTACATGGCTCTTGGCACCATGAGGGAGCACCTTTACAAGGGGAACAAGCCAATGGACACTCTATCGTGGAAACAAAGGTTGGAGATCTGCATTGGAGCCGCGAGAGGTCTTCACTACCTTCACACGGGGGCAAAATACACCATCATTCATAGAGACGTCAAAACAACTAACATTCTCCTCGATGAAAATTGGGTTGCCAAGGTATCAGATTTCGGGTTGTCCAAAACGGGTCCAAACATGAACGCTGGTCATGTTAGTACTGTGGTAAAAGGTAGCTTTGGATACTTGGATCCTGAATATTTCAGGAGACAACAATTGACTGAGAAGTCTGATGTGTACTCATTTGGGGTTGTCCTGTTTGAGGCCCTTTGTGCAAGGCCTGCTCTCAATCCTAGCCTTCCAAAGGAACAAGTAAGCCTTGCAGAATGGGCATTGTACAACATAAGAAGAGGGACACTTGAGGACATCATTGACCCCAACCTTAAAGGAAAAATTAACCCTGAAAGCATGAACAAGTTTGCTGACGCAGCTGAGAAGTGTGTGTCTGATCTTGGATGTGACCGACCCTCTATGAATGATCTATTGTGGAATCTCGAATTTGCTCTCAACTTGGAACTAAACCCCGATGGTTCAACTCACGCTCCTCGTTTTGATGAAAGTGAGTTTGAAGACGTAAACTTGGAAAACAATGCCATGGCAGCTCACTACAAAAACCTTAGCCTTGGAAGTGAGCATGACTTTAGCCACGAGTCCAGTAGTGATAACTCTTCTGCCATCTTCTCCCAAATTGTCAATCAAAAAGGTCGGTGA	2595	0.4486	MYNHMCVLVVLCFPVLLNALPPDKGGDGESLMLGCGLGEGGGKDSDGRQWTPDNKYLSGGNSITSRASFQDPSLLSEVPYMTSRVFTSEATYNFPIQANKRYWLRLHFYPSVYGTFNPPNSYFSVIANGITLLSNFSASITCQALSQAYLDREYSLAPFDLDTLTVTFKPSEKHNGAFAFVNGIQLVQMPDMFDSAALVGFASQTVDTKTLHLQTMFRLNVGGQYISPAQDSGLSRMWYDDTPYLYGAAAGVTNQATQDVKIDYKTVPQYIAPPDVYSTSRSMGTNKDVNMGFNLTWMFQVDPNSMYLTRLHFCDYYYSKVNEIVFKIFINNHTAKADADVIAWTGGKGVPTYKDYVIYAQDRPGDDLLWVALHPSTESRPEFYDAILNGIEVFKLNDTNLSGPNPQPSAMLIKHEEMERTFQESRNSSKRTFVIGSAAGGAAGFALVAAICVVVHRKKRKRAPGSYSASSWLPIYGNSNTTGTKSTVSGKSVGSGNISAMAQGLCRYFSLQEMIQATKNFDEANVIGVGGFGKVYKGVIENGFKVAIKKSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDYMALGTMREHLYKGNKPMDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNAGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLAEWALYNIRRGTLEDIIDPNLKGKINPESMNKFADAAEKCVSDLGCDRPSMNDLLWNLEFALNLELNPDGSTHAPRFDESEFEDVNLENNAMAAHYKNLSLGSEHDFSHESSSDNSSAIFSQIVNQKGR	864

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr6354g00005	864	Gene3D	Phosphorylase Kinase; domain 1	482	596	-	-
	Mupr6354g00005	864	MobiDBLite	consensus disorder prediction	839	864	-	-
	Mupr6354g00005	864	Pfam	Protein tyrosine and serine/threonine kinase	525	789	IPR001245	GO:0004672\|GO:0006468
	Mupr6354g00005	864	SMART	serkin_6	521	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr6354g00005	864	SUPERFAMILY	Protein kinase-like (PK-like)	498	796	IPR011009	-
	Mupr6354g00005	864	ProSiteProfiles	Protein kinase domain profile.	521	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr6354g00005	864	ProSitePatterns	Protein kinases ATP-binding region signature.	527	550	IPR017441	GO:0005524
	Mupr6354g00005	864	FunFam	FERONIA receptor-like kinase	211	397	-	-
	Mupr6354g00005	864	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	643	655	IPR008271	GO:0004672\|GO:0006468
	Mupr6354g00005	864	PANTHER	OS07G0166700 PROTEIN	505	800	IPR045272	GO:0004714\|GO:0006468
	Mupr6354g00005	864	CDD	STKc_IRAK	527	794	-	-
	Mupr6354g00005	864	Gene3D	Transferase(Phosphotransferase) domain 1	600	799	-	-
	Mupr6354g00005	864	FunFam	FERONIA receptor-like kinase	30	190	-	-
	Mupr6354g00005	864	Pfam	Malectin-like domain	34	395	IPR024788	-
	Mupr6354g00005	864	FunFam	receptor-like protein kinase FERONIA	484	596	-	-
	Mupr6354g00005	864	MobiDBLite	consensus disorder prediction	847	864	-	-
	Mupr6354g00005	864	FunFam	Receptor-like protein kinase FERONIA	597	809	-	-
	Mupr6354g00005	864	Gene3D	-	33	190	-	-
	Mupr6354g00005	864	Gene3D	-	211	397	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr6354g00005	Mupr-Chr6354	44634	47228	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr6354g00005	29	864	Receptor kinase-like Gene Family	AT3G51550	53.608	0.0	854

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mupr6354g00005		Malectin_like	8.2e-38	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr6354g00005	-		-	gmx:100791236	1447.95