Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6346g00001 ATGGATGTCGTGGATACTGTCAGAAGGTTAAGTTTTACTTTTTCGAAGTCCATATCCATGTATCGTGGAGTCACCAGAGATTTTTGTAATGGGAAATGGCAAGCAAGTTTTGGTATAGGCAGCGACTACAGATTCCTTGGAATATTCGACACAGAAGAGGAAGCAGCAAGGGCTTCTGATGTTGAAAGCATAAGGTCGAGAGGGCACAAAGCCATTACTAATTTCAATACCAAGTTTTACGACGTTGACGCTATTTTACGTGGAGAAACTGATGATGAAAAAGTAATATGTAAGTTAAAAGGCACTGTCGCTTTGGAAGCAATGCAGCCATTTGAAGGGCTTCAGAACCTTATTGGAAAAGGCACCTCATCAACGATGTTCTATGGTCCAGGCAATATGAACGGAGGGAGGTTCAGGAATTTGCATATCAGGAAACACGTAAGAACAGGCAAATTACGTGGCATTGGCCTCACAAGATGTAAATGA 486 0.4177 MDVVDTVRRLSFTFSKSISMYRGVTRDFCNGKWQASFGIGSDYRFLGIFDTEEEAARASDVESIRSRGHKAITNFNTKFYDVDAILRGETDDEKVICKLKGTVALEAMQPFEGLQNLIGKGTSSTMFYGPGNMNGGRFRNLHIRKHVRTGKLRGIGLTRCK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6346g00001 161 ProSiteProfiles AP2/ERF domain profile. 20 76 IPR001471 GO:0003700|GO:0006355
Mupr6346g00001 161 SMART rav1_2 20 82 IPR001471 GO:0003700|GO:0006355
Mupr6346g00001 161 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 86 - -
Mupr6346g00001 161 CDD AP2 19 75 IPR001471 GO:0003700|GO:0006355
Mupr6346g00001 161 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Mupr6346g00001 161 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6346g00001 Mupr-Chr6346 5588 6542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6346g00001 2 90 AP2-EREBP Transcription Factor Family AT1G51190 49.451 1.16e-20 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr6346g00001 AP2 3e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6346g00001 K09285 - ccaj:109797991 156.762