Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6340g00003 ATGGAGAATATCGACGAAGAGTATAAGCTTTACTGGGAGACCAACATGTTCCTCCGAACCCAAGAGCTCGACAGTTGGGGGTTGGACGAGGCCTTATCGTACTACGATTCCAGCTCCCCCGACGGTGCCGCTTCATCCGCGGCGTCTAAGAACATTGTTTCCGAGAGGAATCGGAGGAAGAAGCTCAATGAAAGGCTTTTCGCGCTTAGATCGGTGGTTCCCAATATTAGCAAGATGGATAAGGCTTCGATTATTAAGGATGCGATTGAGTACATCCAGCACTTGCACGAGCAAGAGAAGATTATCCAAGCAGAGATAATGGAGCTTGAGTCGGGGATGCCCCAAAAGAGTCCAAGTTATGACTTTGAGCAGGAGCAGCTTCCTGTGGTGCTGAGGTCCAAGAAGAAGAGAACAGAGAAGCTATACGATTCTGTTGGTTCAAAAAACTCCCCAATTGAAGTCCTCGAGCTGCGGGTTACATACATGGGGGAGAAGACTGTTGTGGTGAGTTTGACATGCAGCAAAAGGACAGACACAATGGTGAAACTGTGCGAGGTGTTTGAATCTTTGAAGCTCAAGATCATCACTGCCAACATCACTTCGTTTTCTGGGAGGCTTTTGAAGACAGTCTTCGTTGAGGCAAATGAAGAAGAGAAAGATCATTTGCAGATAAAGATCCAGACAGCAATTGCAGCTCTTAATGACCCTCTAAGCCCTATGAGCATTTGA 729 0.4691 MENIDEEYKLYWETNMFLRTQELDSWGLDEALSYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIEYIQHLHEQEKIIQAEIMELESGMPQKSPSYDFEQEQLPVVLRSKKKRTEKLYDSVGSKNSPIEVLELRVTYMGEKTVVVSLTCSKRTDTMVKLCEVFESLKLKIITANITSFSGRLLKTVFVEANEEEKDHLQIKIQTAIAALNDPLSPMSI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6340g00003 242 Gene3D - 42 112 IPR036638 GO:0046983
Mupr6340g00003 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Mupr6340g00003 242 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 42 113 - -
Mupr6340g00003 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 113 IPR036638 GO:0046983
Mupr6340g00003 242 Pfam Helix-loop-helix DNA-binding domain 53 96 IPR011598 GO:0046983
Mupr6340g00003 242 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 45 225 - -
Mupr6340g00003 242 SMART finulus 52 101 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6340g00003 Mupr-Chr6340 8131 16757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6340g00003 1 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 63.927 1.77e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6340g00003 HLH 2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6340g00003 - - gmx:100817978 425.246