Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6334g00001 ATGATAAAAAATAAGGAAGCCAAAATTTTGGAAGCCATTGTCATTGAATATTGTCCAAATGAGTTTCTAGAAACAACAATGAGGGTTGAAGCTCTATCAAAAATGAATCATCTTAAGTTGCTTGTTCTTAAGAATGTGAATTTTTCAGGAAGCCTAAGTTATCTTTCTAATGAATTGAGGTATCTATGTTGGTATGAGTATCCTTTCACGTGTTTGCCATCAAGTTTTCATCCAGATAAACTTGTAGAATTGATCTTGCGTTGTAGCAATATCAAACAATTATGGGAAGGCACAAAGGATCTGCCTAATTTGATATTTCTAGATCTTAGCTACTCCAAAAATCTTATTGAGATCTCAGACTTAAAAGGGGTTCCACGTCTTAAGAAACTTTATCTTAAGGAATGTGTAAATATCGTGCGGATCGATTCATCGATTGGGAATCTAAGAGAGCTTGCTTCTTTGAATTTGAAAAATTGTAAAAATCTTGTCTTTGATGTGAATATTATTTTTGGACTTAAGGAT 522 0.3276 MIKNKEAKILEAIVIEYCPNEFLETTMRVEALSKMNHLKLLVLKNVNFSGSLSYLSNELRYLCWYEYPFTCLPSSFHPDKLVELILRCSNIKQLWEGTKDLPNLIFLDLSYSKNLIEISDLKGVPRLKKLYLKECVNIVRIDSSIGNLRELASLNLKNCKNLVFDVNIIFGLKD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6334g00001 174 SUPERFAMILY L domain-like 27 164 - -
Mupr6334g00001 174 Pfam Leucine Rich Repeat 80 99 IPR011713 -
Mupr6334g00001 174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 162 IPR044974 GO:0006952
Mupr6334g00001 174 Gene3D Ribonuclease Inhibitor 10 168 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6334g00001 Mupr-Chr6334 10836 11691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6334g00001 3 162 WRKY Transcription Factor Family AT5G45050 32.955 1.99e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6334g00001 - - ccaj:114915674 221.09