Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6332g00001 ATGTCATTGAACCGTGGAGGAGAGGACGACCAGCTCTACGAACCACTATGGAAGGCCTGCGCAGGACCCCATGTGGAGGTTCCTCGTGCAGGCCAAAGGGTCTTCTATTTCCCTCAGGGACACATGGAACAATTAGAAGTATCAACAAATCAGGAACTAAATCAAAGGATTCCACTGTTCAAACTTCCCTCCAAGATCCTTTGTCGTGTCGTCAACGTCCATTTACTGGCTGAACAAGAAACAGATGAGGTTTATGCACAGATTACTCTGGTGCCGGAATCTAAACAAAATGAGCCTACAAGCCCTGATCCATGCCCTGCTGAACTTCCAAGGCCAAGAGTTCACTCCTTCTGCAAGGTCTTAACCGCCTCTGATACCAGCACCCATGGTGGCTTCTCTGTCCTTAGGAAGCATGCCACCGAATGTCTTCCAGCATTGGACATGTCTCAATCAATCCCAACTCAGGAATTGGCTGCCAAGGATCTTCAGGGATATGAATGGCGCTTTAAGCATATATTTAGGGGTCAGCCACGTAGACACTTGCTCACAACTGGATGGAGTACTTTTGTGACTTCCAAGAGAGTAGTTGCTGGAGACACATTTGTGTTTCTGAGAGGGGACAATGGAGAATTGCGGGTTGGAGTGAGGCGTTTTGCTCCTGTGCAGAGCAGCATGCCATCATCTGTGATTTCTAGTCAGAGCATGCACCTAGGAGTTCTTGCAACTGCATCTCATGCTGTAGCAACTCAAACTCTTTTTGTTGTATATTATAAGCCAAGGACAAGCCAGTTCATTGTAAGTGTGAACAAGTATTTGGAGGCTATCAATCAAAAATGCAATGTTGGTATGAGATTCAAGATGAGGTTTGAAGGGGATGATTCCCCTGAAACTGACAAAAGATTTTCGGGCACAATAGTTGGAGTAGAGGATATTTCCCCTCACTGGGTAGATTCAAAATGGCGATCACTTAAGGTTCAATGGGATGAACTTGCATCTTTTCCAAGACCTGATAGAGTTTCACCATGGGAGATAGAACCCATTCTGGCTTCTGTTCCTACATCATTATCTCAACCTGCTGTTGTAAAGAATAAAAGGCCTCGACCACCAAGTGAAGTATCAGATCTTGGAGACACACCATTAGCTGCCTCTACTTTCTGGGATGCTGGGATGACACAGTCTGATATGACACAACTGAGTGTCATAGCTGAAAGCAAAAGGAGTGACAGTAGTACCCATATGTGGCATCATAACAGTAAAAGCAGCAGCAATGGTATATCAATGAATCAGAAAGAAGCAAGTTGGCTATCTTCTCCTCATTCTAGTGGTCCTTCTCATTTATATCATGACACAACCGATGATAGCAAGAGCATCTCAGCTTGGCCTATTTCAAAAGCTCACTCAGAAAGATTGAACAATGATCATTTGCTTGACCAGGTTGACAAGGAGATCAACAAACTAGAGGCTGCTACAAGCTGTAGATTGTTTGGGATTGAGCTTATTGACCATGCCAGGAACAACAACAACACTCTTTCTGTAGAGAATGCATCTATGAAAGCAACAAATGCATCTGGAGTCACCTCTGAGCATGAGTCTGATACCTCAAAGGCTTCTAAAGAATGGAAACAAGGACAGCTACAAGTGTCCCCAAAAGAGACTCAAAGCAAGCAAGTTTGTGGCAGAAGTTGCACTAAGGGGGTTGCAGTGGGTCGTGCTGTGGATTTGACAACGTTGGATGGATATGATCAACTTGTAGATGAATTGGAGAAGATGTTTGACATAAAGGGACAGCTTCAACACAGGAATAGGTGGGAAATTGTCTTCACTGATGATGAAGGGGATATGATGCTTGTTGGTGATGATCCATGGCCTGAATTCTGCAATATGGTGAGAAGAATCTTCATTTGTTCCAGCCAGGATGTGCACAAATTAAGCTCAGGGAGCAAACTACCTATCTCTTCCATAGAAGAGACTATAATAAGCTCCAACACAGCTGAGACATGA 2001 0.4428 MSLNRGGEDDQLYEPLWKACAGPHVEVPRAGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPSKILCRVVNVHLLAEQETDEVYAQITLVPESKQNEPTSPDPCPAELPRPRVHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSQSIPTQELAAKDLQGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRVVAGDTFVFLRGDNGELRVGVRRFAPVQSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIVSVNKYLEAINQKCNVGMRFKMRFEGDDSPETDKRFSGTIVGVEDISPHWVDSKWRSLKVQWDELASFPRPDRVSPWEIEPILASVPTSLSQPAVVKNKRPRPPSEVSDLGDTPLAASTFWDAGMTQSDMTQLSVIAESKRSDSSTHMWHHNSKSSSNGISMNQKEASWLSSPHSSGPSHLYHDTTDDSKSISAWPISKAHSERLNNDHLLDQVDKEINKLEAATSCRLFGIELIDHARNNNNTLSVENASMKATNASGVTSEHESDTSKASKEWKQGQLQVSPKETQSKQVCGRSCTKGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQHRNRWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVHKLSSGSKLPISSIEETIISSNTAET 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6332g00001 666 Gene3D - 114 218 IPR015300 -
Mupr6332g00001 666 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 10 644 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr6332g00001 666 SMART B3_2 117 219 IPR003340 GO:0003677
Mupr6332g00001 666 FunFam Auxin response factor 115 219 - -
Mupr6332g00001 666 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
Mupr6332g00001 666 SUPERFAMILY CAD & PB1 domains 563 632 - -
Mupr6332g00001 666 Pfam B3 DNA binding domain 117 217 IPR003340 GO:0003677
Mupr6332g00001 666 CDD B3_DNA 115 217 IPR003340 GO:0003677
Mupr6332g00001 666 Pfam AUX/IAA family 539 643 IPR033389 -
Mupr6332g00001 666 ProSiteProfiles PB1 domain profile. 556 637 IPR000270 GO:0005515
Mupr6332g00001 666 Gene3D - 553 644 - -
Mupr6332g00001 666 SUPERFAMILY DNA-binding pseudobarrel domain 108 246 IPR015300 -
Mupr6332g00001 666 Gene3D - 278 351 - -
Mupr6332g00001 666 FunFam Auxin response factor 278 351 - -
Mupr6332g00001 666 Pfam Auxin response factor 243 324 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr6332g00001 666 MobiDBLite consensus disorder prediction 538 552 - -
Mupr6332g00001 666 MobiDBLite consensus disorder prediction 520 552 - -
Mupr6332g00001 666 MobiDBLite consensus disorder prediction 433 456 - -
Mupr6332g00001 666 MobiDBLite consensus disorder prediction 406 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6332g00001 Mupr-Chr6332 1485 7065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6332g00001 4 649 B3 DNA Binding Superfamily AT4G23980 57.958 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr6332g00001 B3 2.3e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6332g00001 K14486 - gmx:100780060 1120.53