Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6323g00001 ATGGGATCAATGGAGAACGTTTCCAAACCAAGGAAGGAAAATCAGCAGTTTGAATTGCCAGCAGGTTTCAGATTTCACCCAACAGATGAAGAACTCATAATTCACTACCTAGCCAAGAAGGTTGTTGACAGCTGTTTCTGTGCTATGGCCATTGCTGAGGTTGATTTGAACAAGTGTGAGCCATGGGATTTGCCTGGGTTGGCTAAAATGGGTGAAACTGAGTGGTATTATTTCTGTGTGAGGGACAGAAAATACCCAACTGGTCTTAGGGCTAATAGGGCCACTGATGCTGGTTATTGGAAGGCCACAGGCAAAGACAAAGAGATAATAATGGAAAATGCACTCATTGGGATGAAGAAAACCTTGGTTTTCTACAAGGGAAGAGCTCCAAAAGGTGAAAAGACAAACTGGGTTATGCATGAGTATAGGCTGGAAGGGAAACCCAATGAACCCATACCTGGAAAGAGTGAATGGGTTATTTGTAGGGTGTTTGAGAAGAGTCCTGGTGGAAAGAAAATGCATGTTCCAAAGTGTGGGAGGTTCAACTCCTCTGGGGAGGAACCATCATCACCTGCTTCTCTATTGCCTCCTTTAATGGACTCTTCTCCACTAAACAGTGAAACAAGAATCACTGCTGGTGAGTTGTCTCAGGTAACATGCTTCTCTGATCCAAATCAAGCTGAGGATCATAACACAAAAGATGACATTGTTGATAGCATGGAAACTCCTAAATCAAGGCCTGATGATGCTTCAACTTTGGCCAAAGCAACCCTTGCAGTCTCAAACCAATCAACACAGATTGCAGACCAAATTGGGAACTCACAATACCCAGATTACTGTTATGTGCCTCAAGAACAGTCCGTTCTGAGGATGCTGATGGAAAACCATGGACCAAGTGCAAAGCATATTCAGAAAGCAGAGTTTGCTGAGGGAAGGGACTTTGATGCTGATATATCCTCTGTGATATACAACAGTGACATGAGGATGTTTGGGAATCAAGAACATTCATCAGCTTCTGCAGGGCCTGTGGACACTGATTGCCTATGGAATTAC 1053 0.4368 MGSMENVSKPRKENQQFELPAGFRFHPTDEELIIHYLAKKVVDSCFCAMAIAEVDLNKCEPWDLPGLAKMGETEWYYFCVRDRKYPTGLRANRATDAGYWKATGKDKEIIMENALIGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGKPNEPIPGKSEWVICRVFEKSPGGKKMHVPKCGRFNSSGEEPSSPASLLPPLMDSSPLNSETRITAGELSQVTCFSDPNQAEDHNTKDDIVDSMETPKSRPDDASTLAKATLAVSNQSTQIADQIGNSQYPDYCYVPQEQSVLRMLMENHGPSAKHIQKAEFAEGRDFDADISSVIYNSDMRMFGNQEHSSASAGPVDTDCLWNY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6323g00001 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 254 - -
Mupr6323g00001 351 Gene3D NAC domain 28 169 IPR036093 GO:0003677|GO:0006355
Mupr6323g00001 351 FunFam NAC domain-containing protein 100-like 28 170 - -
Mupr6323g00001 351 Pfam No apical meristem (NAM) protein 20 144 IPR003441 GO:0003677|GO:0006355
Mupr6323g00001 351 ProSiteProfiles NAC domain profile. 19 166 IPR003441 GO:0003677|GO:0006355
Mupr6323g00001 351 MobiDBLite consensus disorder prediction 175 196 - -
Mupr6323g00001 351 SUPERFAMILY NAC domain 16 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6323g00001 Mupr-Chr6323 15399 17111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6323g00001 18 351 NAC Transcription Factor Family AT5G07680 51.335 1.99e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr6323g00001 NAM 5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6323g00001 - - gmx:100782172 586.26