Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6316g00001 ATGGATAAACAAAACGAAGCCAGCGAAAGCAACCCCAGAAGCATAATCTTGAACAAATACGAGATGGGGCGGGTGCTGGGGCAAGGAAACTTCGCGAAAGTGTACCATGGGAGAAACCTGAAAACGAACGAGAGCGTAGCCATAAAGGTGATAAAGAAAGAGAAGCTGAAGAAAGAGAGGCTGGTGAAGCAGATCAAGCGCGAGGTGTCGGTGATGAGGCTGGTTCGACACCCCCACATCGTGGAACTCAAGGAAGTTATGGCCACAAAGGGAAAAATCTTCCTCGTCATGGAATACGTCAAGGGCGGCGAACTCTTCTCCAAAGTCGCCAAGGGAAAACTCACCGAAGACCTCGCCAGAAAGTACTTCCAACAACTCATCAGCGCCGTCGACTTCTGCCACAGCCGCGGCGTCACCCACCGCGATCTCAAACCGGAGAATCTCCTCCTCGACCAAAATGAGGACCTCAAGGTCTCCGACTTCGGACTCTCGGCGCTGCCGGAGCAACGCCGCGCCGACGGCATGCTGGTCACCCCGTGTGGGACCCCTGCTTACGTGGCACCCGAAGTTCTTAAAAAAAAAGGCTACGACGGTTCCAAGGCTGATATATGGTCGTGCGGTGTCATTCTCTACGCGTTGCTTTCCGGGTATTTACCCTTCCAAGGTGAGAACGTTATGAGGATTTATAGAAAAGCGTTTAGGGCGCAATACCAGTTCCCTGATTGGATTTCGCCCCAGGCCAAGAATCTTATTTCGAATCTCCTCGTTGCTGACCCTGCCAAGAGGTTTTCTATTCCCGATATTATGAAGGATCCTTGGTTTCAAATTGGCTTCATGAGGCCCATTGCTTTTTCCATCAAGGACTCTGCCAACTTCGATTTCGACGATGTGGACAATGACCAAGAGGTCACAATGGGGAAACCTGCCAGGCCCTTTTACAATGCTTTCGAGATTATTTCCTCGCTCTCGCACGGCTTTGATCTTAGGAATTTGTTTGAGACGAGGAATCGCTCTCCCTCCATGTTTATATGTAAGTTTTCTGCTTCCGCCGTGTTGGCTAAGCTGGACGCGGTGGCGAAGAAGCTCAACTTTAGGGTGACGGGGAAGAAGGAGTTTATGGTCAGGATGCAGGGCACGGAGGAGGGGAGGAAGGGGAAACTGGCCATGACGGTCGAGGTTTTCGAGGTGGCGCCGGAGGTGGCCGTGGTCGAGTTCTCTAAGTCTGCCGGAGACACGCTGGAGTATGTTAAGTTCTGTGAGGAACAAGTCAGACCTTCCCTCAACGACATCGTTTGGAGCTGGCAGGGTGATACGTGGGATTGGAGTATGGAGCATAACTCAAGGAAGGGTAAGTGGGTGTTTGGACCCATACATGAAAAAACGTGCCACGCTACTGGATACCAAACACACGATACATGA 1419 0.5152 MDKQNEASESNPRSIILNKYEMGRVLGQGNFAKVYHGRNLKTNESVAIKVIKKEKLKKERLVKQIKREVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLTEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDQNEDLKVSDFGLSALPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVMRIYRKAFRAQYQFPDWISPQAKNLISNLLVADPAKRFSIPDIMKDPWFQIGFMRPIAFSIKDSANFDFDDVDNDQEVTMGKPARPFYNAFEIISSLSHGFDLRNLFETRNRSPSMFICKFSASAVLAKLDAVAKKLNFRVTGKKEFMVRMQGTEEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYVKFCEEQVRPSLNDIVWSWQGDTWDWSMEHNSRKGKWVFGPIHEKTCHATGYQTHDT 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6316g00001 472 Gene3D Kinase associated domain 1, KA1 316 433 - -
Mupr6316g00001 472 Coils Coil 48 68 - -
Mupr6316g00001 472 CDD CIPK_C 314 428 - -
Mupr6316g00001 472 Gene3D Transferase(Phosphotransferase) domain 1 12 315 - -
Mupr6316g00001 472 ProSiteProfiles NAF domain profile. 308 333 IPR018451 GO:0007165
Mupr6316g00001 472 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6316g00001 472 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Mupr6316g00001 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mupr6316g00001 472 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 427 - -
Mupr6316g00001 472 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6316g00001 472 FunFam Non-specific serine/threonine protein kinase 309 432 - -
Mupr6316g00001 472 FunFam Non-specific serine/threonine protein kinase 12 99 - -
Mupr6316g00001 472 Pfam NAF domain 312 367 IPR004041 GO:0007165
Mupr6316g00001 472 SUPERFAMILY Protein kinase-like (PK-like) 16 275 IPR011009 -
Mupr6316g00001 472 FunFam Non-specific serine/threonine protein kinase 13 309 - -
Mupr6316g00001 472 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6316g00001 Mupr-Chr6316 582 2427 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6316g00001 13 444 CBL-interacting serine-threonine protein kinases AT5G10930 62.273 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mupr6316g00001 Pkinase 2.4e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6316g00001 - - gmx:100812424 763.837