Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6311g00002 ATGTCGTCGTGTTCGTCGTCTTCGGGGTCCGAGGTTGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGCTACCACGCCGTCAGGGTCGCCGATCACTTCGCCGCCGGCAGGTACATAGCGCAGAGGAAGTTGGGTTGGGGTCAGTTTTCCACCGTCTGGCTCGCTTATGATACTAAAACTTCTGGGTGGCCACGGCGCATCCAAACACACTCTAATGAGCCTTTTATGTGTATGACTACCATCTTCATGGATCCAAGACTTTCATATGTTGCTCTCAAGATCCAGAAAAGTGCGGCCCAGTTTGTTCAGGCAGCCCTTCATGAGATTGAGGTTCTTTCATCCATTGTTGACCGTGACCCGTCAAATTCAAAATTTGTCATTCAATTGATTGACCACTTTAAGCACGTGGGTCCAAATGGGCAGCATCTTTGCATGGTCCTTGAGTTTCTTGGCGACAGCTTGCTTCGCTTGATCAGATATAACCGTTACAAGGGTCTTCCATTGAGTAAAGTTAGAGAGATTTGCAAATGCGTTTTGATTGGTTTGGATTACTTGCATACTGATCTTGGTATACTCCACACTGACCTAAAACCTGAAAACATTCTTCTATGCTCAACCATTGATCCTGCCAAAGACCCTTTTAAATCTGAACTTTCCCCAATTCTAGAGCGACCCGAGGGAAACACAAATGTTGGAGTTACAAGTCTTATTGAGAGAAGGTTGAAAAGGAATGCAAGGAAGGCAGTTGCTAAGATATCTGGAAGAAGAACGTCAGTGGGAGGAACAGGAGATGATGCAAAGACTGGTAGAAATGTTGATGGAATTGATGTGAGATGCAAGATAGTAGATTTTGGAAATGCTTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATACAGACAAGGCAGTACAGAGCGCCTGAAGTTATACTGAAGGCTGGCTATTCCTTCTCTGTGGACATGTGGTCTTTTGCTTGCATTGCTTTTGAACTTGCCACTGGAGATATGTTGTTTACACCCAAGGGTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTTCTTGGAAAGATTCCCCGGAAGATTGCTATTGGTGGAGCTCAATCCAAGGATTACTTTGACAGGCATGGGGATCTAAAAAGGATTCGAAGGCTAAAATTTTGTCCACTTGACAAATTGCTGACTGATAGATATAAATTTTCAGTTAAGGATGCTCAAGAGTTCTCAAAATTTCTTGTACCACTCTTTGATTTTGCGCCAGAGAAGCGACCAACCGCGCGACAGTGCCTGCAGCACCCATGGCTGAACTGCACGGAGTCCCCTGCAAATGAATCTACTGTGTAG 1359 0.4533 MSSCSSSSGSEVDDEGFDSYRKGGYHAVRVADHFAAGRYIAQRKLGWGQFSTVWLAYDTKTSGWPRRIQTHSNEPFMCMTTIFMDPRLSYVALKIQKSAAQFVQAALHEIEVLSSIVDRDPSNSKFVIQLIDHFKHVGPNGQHLCMVLEFLGDSLLRLIRYNRYKGLPLSKVREICKCVLIGLDYLHTDLGILHTDLKPENILLCSTIDPAKDPFKSELSPILERPEGNTNVGVTSLIERRLKRNARKAVAKISGRRTSVGGTGDDAKTGRNVDGIDVRCKIVDFGNACWADKQFAEEIQTRQYRAPEVILKAGYSFSVDMWSFACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKIPRKIAIGGAQSKDYFDRHGDLKRIRRLKFCPLDKLLTDRYKFSVKDAQEFSKFLVPLFDFAPEKRPTARQCLQHPWLNCTESPANESTV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6311g00002 452 ProSiteProfiles Protein kinase domain profile. 39 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6311g00002 452 SMART serkin_6 39 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6311g00002 452 Gene3D Transferase(Phosphotransferase) domain 1 119 440 - -
Mupr6311g00002 452 SUPERFAMILY Protein kinase-like (PK-like) 33 443 IPR011009 -
Mupr6311g00002 452 Pfam Protein kinase domain 279 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6311g00002 452 Pfam Protein kinase domain 91 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6311g00002 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mupr6311g00002 452 Gene3D Phosphorylase Kinase; domain 1 25 150 - -
Mupr6311g00002 452 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 256 443 - -
Mupr6311g00002 452 FunFam Serine/threonine-protein kinase SRPK 144 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6311g00002 Mupr-Chr6311 8680 12562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6311g00002 5 441 EF-hand Containing Proteins AT5G22840 45.175 4.40e-141 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Mupr6311g00002 Pkinase 3.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6311g00002 K08832 - gmx:100784192 766.918