Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6310g00001 AATAGCGGCTATCCCGCTATCCGCTATCCCGCTATCCCAGTTCAGGGGTTAGCCGCTCCGCTCTGCTATCTGGGATTAACTACTATGGAGGAAATAAGGAAACTACTCCTAGAGGTTAATGATGTGGTTACTGAGAATGAGTTTGAGAAAAAATTACTTGGTGATGTTATTCCACCAACTGATATTGGGGTCACATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAACTGTTTGGCAGAGGACAGCTGGCCAAGCCTTGCAAGGGAATATTGCTTTTTGGGCCCCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTTATTAACATTTCAATGTCCAGCATTACTTCCAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCTAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTCATGGTCAATTGGGACGGTTTGCGAACAAAGGATAAAGAGCGTATACTTGTTCTTGCTGCTACAAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTGATGGTTAATTTGCCAGAAGCTCAAAATAGAGGAAAAATTGTCAGAGTTATTTTAGCAAAAGAAGATTTAGCACCTGATGTTGATTTTGAAGCAATAGCTAATATGACTGATGGATATTCAGGGAGTGACCTAAAGAATCTCTGTGTCACAGCAGCTCACTGCCCAATAAGAGAGATCTTGGAGAAGGAAAAGAAGGAGAGAAGCTTAGCATTGGATGAGAACCAACCTTTACCTGGGTTGTGTAGCAGTACTGACATTCGCCCCTTAAAGATGAAGGATTTTACATTTGCACATGAGCAGGTTTGTGCTAGTGTGTCATCGGAGTCAACAAGTATGAATGAACTACTCCAATGGAACGATCTCTATGGAGAAGGCGGATCAAGAAAAATGAGATCTTTGAGCTATTTCATTAGAGCAACTTGA 1119 0.4173 NSGYPAIRYPAIPVQGLAAPLCYLGLTTMEEIRKLLLEVNDVVTENEFEKKLLGDVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFGRGQLAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPEAQNRGKIVRVILAKEDLAPDVDFEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLALDENQPLPGLCSSTDIRPLKMKDFTFAHEQVCASVSSESTSMNELLQWNDLYGEGGSRKMRSLSYFIRAT 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6310g00001 372 ProSitePatterns AAA-protein family signature. 208 227 IPR003960 GO:0005524|GO:0016887
Mupr6310g00001 372 SMART AAA_5 101 238 IPR003593 GO:0016887
Mupr6310g00001 372 Gene3D - 237 331 - -
Mupr6310g00001 372 Pfam AAA+ lid domain 258 294 IPR041569 -
Mupr6310g00001 372 Pfam ATPase family associated with various cellular activities (AAA) 105 234 IPR003959 GO:0005524|GO:0016887
Mupr6310g00001 372 Gene3D - 63 342 IPR027417 -
Mupr6310g00001 372 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 34 368 - -
Mupr6310g00001 372 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 63 240 - -
Mupr6310g00001 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 340 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6310g00001 Mupr-Chr6310 211 7375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6310g00001 100 305 Calmodulin-binding Proteins AT3G56690 35.714 3.89e-34 132