Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6309g00001 ATGCCACTCCCTGATTGGTGGATTCGAAACCCCCATTTCATTTCACTTCATCATTCGAATAAATTCCTCTACAGTCAACCGCTTCAACCCGCTCGCACTTTCCCCAAACCCTTCTGCTCCGGGCTTTCCCTCTCCCCGGCTCTTCCGGTTCCCCGCGACTTCATTTGGACTTCATTTGACGTGCATTTCAGCATCATTTCATTTCATTTCACTGCCATTCCGCTCTCCCCCATTGGTTCGTTTTTTAAATTCGCCCTAAATTTCTCTCCATTTCAATTTCATTTTCGAAGACGTTATTCCCTCTTCCCATGTTTCCTCGGTTCTATAGATGGAGATGGAAACCCTGAATCTTACTTTCGCTCAATCTCATTCTCTGCTTCAGATTCAGTTTTCGCCTTTTGCCATTCTCCGTTTCGATTGACGCAAAGCCTTTTCCTCTTCCCGTTATATTTTTTCATCGGGTTTGGAATTCGATCTTCACCTCATCCACTCCTAATAGCTAACCGAAGCATGTGCGGTGGTCCAGAGAAATCAAAATCTCTTTCAACTCCATCTTCGTCTGCTGGAGAAGGTTCAACTAACGTTAGAGACATGAAAAATCTAACTGTTCATACTGAAGATTCTTTTTCCTGCTTACTTGAGCTCGCTTCTAACAATGATTTTGAAGATTTTAAGCTAGCTTTAGATAGGGATGCTTCTCTAATAAATGAAGTTGGGCTGTGGTATGTCCGTCAAGTTGGATCCAAACAAATTGTTCTTGAGCACCGAACTCCTTTAATGGTTGCTGCAATCTATGGGAGTATCGATGTTCTAAAACTTATACTCTCCTGTCCAGATGCTGATGTAAATTTCTCCTGTGGGACAGATAAAAGCACTGCCCTTCACTGTGCTGCTTCAGGTGGTTCTGTTAATGCAGTTGATGTTGTGAAATTGCTCTTATCAGTTGGTGCTGATATCAATTGTGTGGATGCTAATGGAAATCGCCCCATTGATGTTATTGTTGTTCCTCCTAAGCTCAATCTGAAAGCTAGGCTTGAAGATCTACTTTCAGATAGTGCTAATGATGAGTCTGTTTTTGAATGTTCTATTCCAGTATCTGTTAATTCATCCAGTTCTGATTCAGCTGCTCATTTATCATCACCTGATAATGGGTTGCCATCCTCTCCTATGGCATCAAAGTTTACTGACACAGCTGTTAATTCTACATCAGAGAAAAAAGAATACCCAGTTGATCCATCACTTCCTGATATAAAGAACAGCATTTATGCAACGGATGAGTTTCGCATGTTTTCATTCAAGGTGCGTCCTTGTTCCAGGGCATACTCTCATGATTGGACTGAGTGTCCTTTTGTTCACCCTGGAGAGAATGCTCGTAGGAGAGATCCCAGAAAGTTCCATTACAGCTGCGTGCCATGCCCTGATTTTAGAAAGGGGGCTTGTAGACGAGGGGACATGTGTGAATATGCTCATGGAGTATTTGAGTGCTGGCTACACCCAGCCCAATATCGCACCAGGCTGTGCAAAGATGGTACTAGTTGCAATAGAAGGGTATGTTTTTTTGCTCACACAGCTGAAGAGCTGCGTCCACTGTATGTGTCTACTGGATCTGCCGTTCCTTCGCCTCGTTCATCTGCCTCTACTCCTAATGTCATGGACATGGCTGCTGCAATGAGCCTCTTTCCTAGTTCACCATCATCAATTTCTTCCATGTCTCCATCTCCCTTTGCGCAGCCAATGTCTCCATCTACAAGTGGCATTTCTCACTCATCCACTGCTTGGCCACAGCCAAATGTTCCAGCTCTTCATTTACCACTTAGCAATATTCAAACTAGCCGATTGAGATCTTCTCTTAATGCTCGTGACATGCCACCTGAGGACTTTGATGTGTTGCAAGATTTTGATGGCCAGCAACACCTTTTGAATGACTTGGGCTGTTTCTCGCAGCCCCGTCCCGATGCCATTGCCATTTCAGTGAGTCGATCTGGTCGGTCTAAGACACTAACTCCATCAAATCTTGATGATCTATTTTCTGCTGAAATTTCTTCATCTCCTCGGTATTCTGACACAACAGCGGCTTCTGTGTTTTCCCCAACACACAAATCAGCCCTTTTAAATCAGTTTCAACAGCTTCAGAGTTCACTATCACCCATAAATACAAATGTCTCGTCTCCTAGGAATGTTGAGCATCCTCTATTACAGGCTTCATTTGGTGTTTCCTCTCCCGGAAGGATGTCACCAAGAAGTATGGAACCAATCTCTCCGATGAGCTCTCGATTATCAGCGTTTGCTCAGCGTGAGAAACAGCAGCAACAGCTACGGAGCCTTAGTTCAAGGGAGCTTAGTGCCAACAGTCCTGTCTCAATTGTTGGGTCCCCAGTTAATTCCTGGTCCAATTGGGGATCTCCTAATGGAAATGGAAAAGTAGATTGGTCAGTAAATGGAAATGAGCTAGGTCGATTGCAAAGATCATCCTCATTTGAGCTTGGAAACAATGGGGAGGAGCCTGATCTATCCTGGGTCCAATCCCTTGTCAAGGAATCCCCAACCGAGATAAAAGACAAGTTGGCAGGTTCTGGTCCTGTTGCATCTGCTGATGGATGGAATTCCAATCCTCAAGTTGATTCTGCTGATCATTCTGTTCTAGGGGCCTGGCTTGAGCAAATGCAGCTCGATCAGCTTGTAGTCTAA 2688 0.4427 MPLPDWWIRNPHFISLHHSNKFLYSQPLQPARTFPKPFCSGLSLSPALPVPRDFIWTSFDVHFSIISFHFTAIPLSPIGSFFKFALNFSPFQFHFRRRYSLFPCFLGSIDGDGNPESYFRSISFSASDSVFAFCHSPFRLTQSLFLFPLYFFIGFGIRSSPHPLLIANRSMCGGPEKSKSLSTPSSSAGEGSTNVRDMKNLTVHTEDSFSCLLELASNNDFEDFKLALDRDASLINEVGLWYVRQVGSKQIVLEHRTPLMVAAIYGSIDVLKLILSCPDADVNFSCGTDKSTALHCAASGGSVNAVDVVKLLLSVGADINCVDANGNRPIDVIVVPPKLNLKARLEDLLSDSANDESVFECSIPVSVNSSSSDSAAHLSSPDNGLPSSPMASKFTDTAVNSTSEKKEYPVDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTAEELRPLYVSTGSAVPSPRSSASTPNVMDMAAAMSLFPSSPSSISSMSPSPFAQPMSPSTSGISHSSTAWPQPNVPALHLPLSNIQTSRLRSSLNARDMPPEDFDVLQDFDGQQHLLNDLGCFSQPRPDAIAISVSRSGRSKTLTPSNLDDLFSAEISSSPRYSDTTAASVFSPTHKSALLNQFQQLQSSLSPINTNVSSPRNVEHPLLQASFGVSSPGRMSPRSMEPISPMSSRLSAFAQREKQQQQLRSLSSRELSANSPVSIVGSPVNSWSNWGSPNGNGKVDWSVNGNELGRLQRSSSFELGNNGEEPDLSWVQSLVKESPTEIKDKLAGSGPVASADGWNSNPQVDSADHSVLGAWLEQMQLDQLVV 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6309g00001 895 Gene3D - 466 529 - -
Mupr6309g00001 895 PRINTS Ankyrin repeat signature 308 322 IPR002110 GO:0005515
Mupr6309g00001 895 PRINTS Ankyrin repeat signature 255 270 IPR002110 GO:0005515
Mupr6309g00001 895 FunFam Zinc finger CCCH domain-containing protein 66 424 492 - -
Mupr6309g00001 895 Gene3D - 193 360 IPR036770 -
Mupr6309g00001 895 MobiDBLite consensus disorder prediction 750 784 - -
Mupr6309g00001 895 ProSiteProfiles Ankyrin repeat region circular profile. 289 323 - -
Mupr6309g00001 895 SMART ANK_2a 254 284 IPR002110 GO:0005515
Mupr6309g00001 895 SMART ANK_2a 289 321 IPR002110 GO:0005515
Mupr6309g00001 895 SMART ANK_2a 207 237 IPR002110 GO:0005515
Mupr6309g00001 895 MobiDBLite consensus disorder prediction 370 407 - -
Mupr6309g00001 895 SUPERFAMILY Ankyrin repeat 202 335 IPR036770 -
Mupr6309g00001 895 MobiDBLite consensus disorder prediction 570 593 - -
Mupr6309g00001 895 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 471 491 IPR000571 GO:0046872
Mupr6309g00001 895 SMART c3hfinal6 501 524 IPR000571 GO:0046872
Mupr6309g00001 895 SMART c3hfinal6 466 492 IPR000571 GO:0046872
Mupr6309g00001 895 ProSiteProfiles Ankyrin repeat profile. 289 324 IPR002110 GO:0005515
Mupr6309g00001 895 PANTHER UNKEMPT FAMILY MEMBER 214 847 IPR045234 -
Mupr6309g00001 895 MobiDBLite consensus disorder prediction 370 411 - -
Mupr6309g00001 895 ProSiteProfiles Zinc finger C3H1-type profile. 471 493 IPR000571 GO:0046872
Mupr6309g00001 895 MobiDBLite consensus disorder prediction 736 784 - -
Mupr6309g00001 895 Pfam Ankyrin repeats (3 copies) 241 323 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6309g00001 Mupr-Chr6309 4402 8285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6309g00001 171 892 C2H2 Transcription Factor Family AT5G12850 54.167 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr6309g00001 Ank_2 5.5e-10 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6309g00001 - - gmx:100792574 1245.72