Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6308g00001 ATGAGTTGCAACGGGTGCCGGGTCCTTAGAAAGGGTTGCAGCGAGTCTTGCATCCTGCGACCGTGTCTACAGTGGATCGACACGCCCGAAGCCCAAGGCCATGCCACCGTCTTTGTAGCCAAATTCTTTGGCCGTGCCGACCTCATGTCTTTCATTTCCAACGTCCCTGAACCCCAGAGACCCGCTCTGTTTCAATCTCTGCTGTTCGAAGCCTGCGGAAGAACGGTTAACCCCATCAATGGCGCCGTGGGGCTTCTGTGGACCGGAAACTGGCACGTGTGCCAGGCAGCGGTTGAGACGGTGCTCCGCGGCGGCACCCTCAGGCCCATGCCGGAGCTTCTCGGTCTAGACGCTCCTGCCGATGACGCCTCTGAAGGAGAAGTTACCTGTACCGACAAGTGGAAGGTCCGAGATCCAAACCCGAATTTCCGGTTCCCGGGCTCCAGGTCCGATAAGGTTGCTTCCGACTGTAAACGCAAGCGATGTGATGAGCTCGCCAAGTTCCAGACGACTGCCGATCTCAATCTCCGGTTGACCCCCAGTTTCGGCTGCGGGCATGAAATTCGCCGCTCGGGGTCGCCGTCGATGAACTCCGAGGAGTCAGGGACGACGACGGCGTGCCTGGAAAGCGGGATCGGAGATCACTACGCTGCCGACGGAGACCGGAAAGTGTTGAACCTTTTCTTTTGA 690 0.587 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRADLMSFISNVPEPQRPALFQSLLFEACGRTVNPINGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELLGLDAPADDASEGEVTCTDKWKVRDPNPNFRFPGSRSDKVASDCKRKRCDELAKFQTTADLNLRLTPSFGCGHEIRRSGSPSMNSEESGTTTACLESGIGDHYAADGDRKVLNLFF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6308g00001 229 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Mupr6308g00001 229 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Mupr6308g00001 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6308g00001 Mupr-Chr6308 14315 15090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6308g00001 1 228 AS2 family AT3G49940 55.600 1.92e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr6308g00001 LOB 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6308g00001 - - gmx:100802764 423.32