Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6293g00001 ATGGATTCTTCTGCTGTCGTGGGTAGCACAATTTCAGAGACTCAGAATGAGATGGAATTTGAATCTCATGAAGCTGCATATGCATTTTACAAAGAATATGCTAAGTCTGCGGGATTCGGCACTGCTAAGTTGAGCAGTCGGCGGTCTAGGGCATCAAAAGAATTTATTGATGCCAAATTTTCATGTATAAGATATGGTAATAAGCAGCAATCTGATGACGCAATTAATCCACGCCCTTCTCCAAAAATTGGTTGTAAAGCAAGCATGCATGTGAAGAGAAGGCAAGATGGTAAATGGTATGTCTATAGCTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCTCAAGCTCATTTTTTTCGGAGTCATAGGAGTTCTGATCCACTAAGTAATGATGTTCGTATGCGAAGGCGGAAGAACTCAAATGCAGTTTCTAAATTATTTACTGCATACCAGAATGTTGATTGCTTAGAGAACTTTGTGAAACATCAACATGATAAAGGACGAAGTTTGGTTCTAGAAGCAGGACATGCCCAATTGCTTCTTGAACTCTTCATGCACATGCAGGAAGAGAATCCAAAATTTTTCTATGCAGTTGATTTGAATGAAGAACACCGACTAAGAAATGTGTTCTGGGTTGATGCTAAAGGTTTGGAAGATTTTGCTTACTTTTCTGATGTTGTTTCTTTTGACACAACATATTTTACAAGCAAATATAAAATACCATTGGTCCTTTTCATTGGAGTAAACCATCATATTCAACCGACATTGCTTGGTTGTGCATTGATTGCTGATGAGACAATATATACTTTTGCCTGGTTACTGCAAACATGGCTGATAGCAATGGGGGAACGAGCTCCACAAGTGCTTCTCACCGACCAAAATGAGGCTATTAAAGCAGCTGTTGCAGCCTTACTTCCAGGAACACGTCATTGTTTTTGTTTGTGGCATATTTTGGAAAAGATACCAAAACAACTAGAATTTGTAGGCACGTGGCCTGATGGCTTTATGATAAAATTTAACAAGTGTATATATAAATCATGGACAGAGGAGCAATTTGAAAAGAGATGGTGGAAGTTGGTTGACAGGTTTAACATTAGAGATGTTGAGTGGGTCCGATCCTTATATGATGACCGTACATGTTGGGTGCCAACTTTTATGAAAGATATTTCTTTTGCTGGCTTGTCTACTAGTTCACGCTCAGAAAGTTTAAATTCATTGTTTGACAACTATGTCCAAGTTGATACTTCATTGAGAGAATTTATAGAACAGTATAGAGTGATTCTTGAAGATAGGCACGAAGAGGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCTGAATTGAAGTCTCCTTCCCCTTTTGAAAAGCAAATGTTGTTAGTTTACACACATGAAATTTTTAAAAAGTTCCAGGTTGAGGTTTTGGGTGCAGCTGCTTGTCATCTTAAGAAAGAAAATGATGGTGTGACTACTACTTATACTGTGAAAGACTTTGAAAATAATCAAAACTATATAGTAGAATGGAACACATCAAGCTCAGATCTATGTTGTTCTTGTAACTTGTTTGAATATAAAGGTTATCTCTGTAGACATGCCATTGTTGTTCTACAAATGTCTGGTGTCTTCAGCATTCCACCAAAGTATATACTGCAAAGATGGACAAATGCTGCTATGAGCAGGCATCCTATTGGTGAAAAATTGGAAGAGGTTCAATCAAAGGTTCGACGATTCAATGATTTGTGTAGACGGGCTATAATATTAGGTGAAGAAGGTTCTTTGTCACAAGAAAGTTACTATATTGCTTTAGGTGCCATAAGTGAGGCACTAAAGCAATGTGCAAATTTGAACAACTCTGTTGAGAATGGTATGAGACCTGATGCCCCAGGTACCCATGTTGTTTGTAATGTTGGTGATGAATATCAATCTATTATTACATCTAACAATAAGGTCCCCGATCCAAAACTGAATACGGGAAAGAAAGCCGTGAGGACTGGAGTAGCTGGTAGGAGTCTAGGAAGTGTTGAAAACAGTGAAGGAAATAAAGGAAAGGTATCTCAGTTCGAAGCAGGTAGCGGGAAAGATGGCTTTCAACAATTGGAACCGACTGATCTAAGAACACACAGTGTCATGCCAATGCAGTTTCACACTGTGGTACCTGCTCTGTTCCATAATGTTTCGTCATCTTTTCATACTGCACCTTCAACTCATATGCACGAGAATCGTTAG 2232 0.3853 MDSSAVVGSTISETQNEMEFESHEAAYAFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRSSDPLSNDVRMRRRKNSNAVSKLFTAYQNVDCLENFVKHQHDKGRSLVLEAGHAQLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDAKGLEDFAYFSDVVSFDTTYFTSKYKIPLVLFIGVNHHIQPTLLGCALIADETIYTFAWLLQTWLIAMGERAPQVLLTDQNEAIKAAVAALLPGTRHCFCLWHILEKIPKQLEFVGTWPDGFMIKFNKCIYKSWTEEQFEKRWWKLVDRFNIRDVEWVRSLYDDRTCWVPTFMKDISFAGLSTSSRSESLNSLFDNYVQVDTSLREFIEQYRVILEDRHEEEAKANFDAWHETPELKSPSPFEKQMLLVYTHEIFKKFQVEVLGAAACHLKKENDGVTTTYTVKDFENNQNYIVEWNTSSSDLCCSCNLFEYKGYLCRHAIVVLQMSGVFSIPPKYILQRWTNAAMSRHPIGEKLEEVQSKVRRFNDLCRRAIILGEEGSLSQESYYIALGAISEALKQCANLNNSVENGMRPDAPGTHVVCNVGDEYQSIITSNNKVPDPKLNTGKKAVRTGVAGRSLGSVENSEGNKGKVSQFEAGSGKDGFQQLEPTDLRTHSVMPMQFHTVVPALFHNVSSSFHTAPSTHMHENR 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6293g00001 743 SMART 26again6 517 544 IPR006564 GO:0008270
Mupr6293g00001 743 MobiDBLite consensus disorder prediction 668 697 - -
Mupr6293g00001 743 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 616 IPR031052 GO:0006355
Mupr6293g00001 743 MobiDBLite consensus disorder prediction 672 686 - -
Mupr6293g00001 743 Pfam FAR1 DNA-binding domain 29 114 IPR004330 -
Mupr6293g00001 743 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
Mupr6293g00001 743 Pfam MULE transposase domain 227 320 IPR018289 -
Mupr6293g00001 743 Pfam SWIM zinc finger 513 540 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6293g00001 Mupr-Chr6293 6766 9836 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mupr6293g00001 MULE 2.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6293g00001 - - gmx:100805273 1412.51