LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr6292g00001	ATGTCTAAAACCCTATCCCTTTTTGTAGTTACCGAATTGAGCCGTATCGAGTTAGGCGCGGCGGGATCAGGACCAGATTTCAAGATGAAGTTTAACATTGCAAATCCCACCACTGGATGCCAGAAGAAGCTGGAAATTGATGACGACCTCAAGCTTCGGGCATTTTGGGACAAGAGGATCTCCCAGGAGGTCCTTGGTGACGCCCTGGGCGAGGAGTTTAAAGGCTATGTTTTCAAAATCACGGGTGGGTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGCTGACCCCTGGTCGTGTCCGACTCTTGCTCCATAGAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGTAACGGAGAGCGTAGAAGGAAGTCTGTTCGTGGGTGTATTGTCAGCCCAGACCTCTCTGTTTTGAACTTGGTGATTGTGAAGAAGGGTGAAAGTGACTTGCCTGGTCTGACTGATGTTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCATCCAAAATCCGAAAGCTGTTCAACCTGTCCAAAGAGGATGATGTGAGAAAGTATGTTAACACATACCGTCGAACCTTTACAACAAAAGCTGGGAAAAAGGTGAGCAAAGCTCCAAAGATTCAACGACTGGTCACTCCTTTGACCCTCCAAAGGAAGAGGGCAAGGATTGCTGATAAGAAGAAAAGAATTGCTAAGGCAAAATCAGAAGCAGCAGAGTATCAGAAACTCCTTGTATCCAGGTTGAAGGAGCAGAGGGATCGCCGGAGTGAGAGCTTGGCCAAGCGGAGATCCAAACTTTCCAGTGCTTCCAAACCAACTGTCACGGCATAG	834	0.482	MSKTLSLFVVTELSRIELGAAGSGPDFKMKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLVSRLKEQRDRRSESLAKRRSKLSSASKPTVTA	277

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr6292g00001	277	Coils	Coil	217	244	-	-
	Mupr6292g00001	277	ProSitePatterns	Ribosomal protein S6e signature.	80	91	IPR018282	GO:0003735\|GO:0005840\|GO:0006412
	Mupr6292g00001	277	SMART	Ribosomal_S6e_2	29	156	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Mupr6292g00001	277	Gene3D	-	161	262	-	-
	Mupr6292g00001	277	PIRSF	RPS6e	29	277	IPR014401	GO:0003735\|GO:0005840\|GO:0006412
	Mupr6292g00001	277	PANTHER	40S RIBOSOMAL PROTEIN S6	29	268	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Mupr6292g00001	277	Pfam	Ribosomal protein S6e	29	156	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Mupr6292g00001	277	MobiDBLite	consensus disorder prediction	248	277	-	-
	Mupr6292g00001	277	MobiDBLite	consensus disorder prediction	248	265	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr6292g00001	Mupr-Chr6292	4605	7153	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr6292g00001	29	277	Cytoplasmic Ribosomal Protein Gene Family	AT5G10360	71.486	2.87e-118	335

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr6292g00001	K02991		-	gmx:100786559	434.491