Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6292g00001 ATGTCTAAAACCCTATCCCTTTTTGTAGTTACCGAATTGAGCCGTATCGAGTTAGGCGCGGCGGGATCAGGACCAGATTTCAAGATGAAGTTTAACATTGCAAATCCCACCACTGGATGCCAGAAGAAGCTGGAAATTGATGACGACCTCAAGCTTCGGGCATTTTGGGACAAGAGGATCTCCCAGGAGGTCCTTGGTGACGCCCTGGGCGAGGAGTTTAAAGGCTATGTTTTCAAAATCACGGGTGGGTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGCTGACCCCTGGTCGTGTCCGACTCTTGCTCCATAGAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGTAACGGAGAGCGTAGAAGGAAGTCTGTTCGTGGGTGTATTGTCAGCCCAGACCTCTCTGTTTTGAACTTGGTGATTGTGAAGAAGGGTGAAAGTGACTTGCCTGGTCTGACTGATGTTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCATCCAAAATCCGAAAGCTGTTCAACCTGTCCAAAGAGGATGATGTGAGAAAGTATGTTAACACATACCGTCGAACCTTTACAACAAAAGCTGGGAAAAAGGTGAGCAAAGCTCCAAAGATTCAACGACTGGTCACTCCTTTGACCCTCCAAAGGAAGAGGGCAAGGATTGCTGATAAGAAGAAAAGAATTGCTAAGGCAAAATCAGAAGCAGCAGAGTATCAGAAACTCCTTGTATCCAGGTTGAAGGAGCAGAGGGATCGCCGGAGTGAGAGCTTGGCCAAGCGGAGATCCAAACTTTCCAGTGCTTCCAAACCAACTGTCACGGCATAG 834 0.482 MSKTLSLFVVTELSRIELGAAGSGPDFKMKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLVSRLKEQRDRRSESLAKRRSKLSSASKPTVTA 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6292g00001 277 Coils Coil 217 244 - -
Mupr6292g00001 277 ProSitePatterns Ribosomal protein S6e signature. 80 91 IPR018282 GO:0003735|GO:0005840|GO:0006412
Mupr6292g00001 277 SMART Ribosomal_S6e_2 29 156 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mupr6292g00001 277 Gene3D - 161 262 - -
Mupr6292g00001 277 PIRSF RPS6e 29 277 IPR014401 GO:0003735|GO:0005840|GO:0006412
Mupr6292g00001 277 PANTHER 40S RIBOSOMAL PROTEIN S6 29 268 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mupr6292g00001 277 Pfam Ribosomal protein S6e 29 156 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mupr6292g00001 277 MobiDBLite consensus disorder prediction 248 277 - -
Mupr6292g00001 277 MobiDBLite consensus disorder prediction 248 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6292g00001 Mupr-Chr6292 4605 7153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6292g00001 29 277 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.486 2.87e-118 335