Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6291g00001 ATGTCAAGCCAGAATCGTCGCCGTTCATCGTTTTCGTCCTCAACGACGTCGTCTCTGGCGAAACGCCATGCATCCTCCTCCGACAACAACGTGGGAGGGAAGGTCTTAGCTGTTCCTACAAAAAACGTGGCCAAGAAGCGCCCACCGCTCACTAACCTCACCAACACCGTCGCTCACCGCAACTCTTCCTCTTCGGTGCCGTGCGCAGCTAAAGTTGCGAAAACCAAGAAGGAGGTTGTTGTTCCGGCATGCTCAGGAAATAAGAGGCCCACATTGGCGAATGTTAAACCTACCAATGCTGTTGTTTTTCCTAAGGCGAATTCTCTTCCTGTAAGGAATGAAGCTCCTCCTCCTCCTCCTCCTTCAGTTGTTACTGTTCCTGCTCCGAGCAAAACGGTGGATGTTTCGCCTACTAAATCAGATGCAATGTCAGTTTCTATGGATGAGTCAATGTCTTCTTGTCATTCCTTCAAGAGCCCCGGCATTGAATATGTGGATAATAGCGATGTTTCCGCTGTTGATTCAATTGAGAGGATGACGTTCAGCAATCCCAACATCTCTGATTCTACAGAATCAGCAGACAACATCTGTATTAGAGACATACTTGTTCAGTTGGAAAAAGGGGACAAAATTGTCAATATTGATAATAATTACACGGATCCGCAGCTCTGTGCTTCTTTTGCCTGTGATATCTACAAGAACCTTCATGCATCTGAGGCAAAGAAAAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAGGACTTAAATCCCAGCATGCGTGCTATGTTGATTGACTGGCTTGTGGAGGTGGCTGAAGTGTATAGATTAGTACCTGATACATTGTATTTGACAGTAAACTACATTGATCGGTATCTTTCAGGGAATGTGATGAACAGACAAAGGTTACAATTGCTTGGTGTTGCCTCCATGATGATTGCCTCTAAGTACGAGAAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTACATAACTGATAACACATACTTGAAAGAAGAGATGGAATGTGCTGTCTTGAATTTTCTGAAGTTCGAAATGACAGCCCCAACAGTAAAATGTTTCTTAAGAAGATTTGTACGTGCAGCTCGAGGAATCGATGAGGTCCCTTCGCTGCAACTAGAGTGCTTGACAAACTATATTGCCGAATTGTCTCTCTTGGAGTACAATATGCTTTGTTATGCTCCATCACTTATAGCCGCTTCTGCAATTTTCCTGGCCAAATTTATACTTTTCCCTTCAAAGAAACCATGGAATTCCACATTGCAGCATTACACGCTGTACCAGCCTTCTGATCTGTGTGTTTGTGTAAAGGATCTTCACAGTCTTTGTTTTAATAGCCCTAACTCTAATTTGCCTGCAATTAAGGAGAAATACAGTCAGCACAAGTACAAATATGTGGCCAAGAAGTACTGCCCTCCTTCAATACCTGCAGAAATTTTCCAGAACTGA 1470 0.4374 MSSQNRRRSSFSSSTTSSLAKRHASSSDNNVGGKVLAVPTKNVAKKRPPLTNLTNTVAHRNSSSSVPCAAKVAKTKKEVVVPACSGNKRPTLANVKPTNAVVFPKANSLPVRNEAPPPPPPSVVTVPAPSKTVDVSPTKSDAMSVSMDESMSSCHSFKSPGIEYVDNSDVSAVDSIERMTFSNPNISDSTESADNICIRDILVQLEKGDKIVNIDNNYTDPQLCASFACDIYKNLHASEAKKRPSTDFMERIQKDLNPSMRAMLIDWLVEVAEVYRLVPDTLYLTVNYIDRYLSGNVMNRQRLQLLGVASMMIASKYEKICAPQVEEFCYITDNTYLKEEMECAVLNFLKFEMTAPTVKCFLRRFVRAARGIDEVPSLQLECLTNYIAELSLLEYNMLCYAPSLIAASAIFLAKFILFPSKKPWNSTLQHYTLYQPSDLCVCVKDLHSLCFNSPNSNLPAIKEKYSQHKYKYVAKKYCPPSIPAEIFQN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6291g00001 489 CDD CYCLIN_AtCycA_like_rpt1 220 352 - -
Mupr6291g00001 489 CDD CYCLIN_AtCycA-like_rpt2 356 470 - -
Mupr6291g00001 489 Gene3D - 230 475 - -
Mupr6291g00001 489 PANTHER CYCLINS 177 467 IPR039361 -
Mupr6291g00001 489 MobiDBLite consensus disorder prediction 111 126 - -
Mupr6291g00001 489 FunFam Mitotic cyclin 6 244 343 - -
Mupr6291g00001 489 Pfam Cyclin, N-terminal domain 230 353 IPR006671 -
Mupr6291g00001 489 SUPERFAMILY Cyclin-like 356 481 IPR036915 -
Mupr6291g00001 489 SMART cyclin_7 360 448 IPR013763 -
Mupr6291g00001 489 SMART cyclin_7 266 350 IPR013763 -
Mupr6291g00001 489 PIRSF Cyclin_A_B_D_E 4 486 IPR046965 GO:0016538|GO:0044772
Mupr6291g00001 489 FunFam Cyclin A1 344 475 - -
Mupr6291g00001 489 Pfam Cyclin, C-terminal domain 356 475 IPR004367 -
Mupr6291g00001 489 SMART Cyclin_C_2 356 479 IPR004367 -
Mupr6291g00001 489 MobiDBLite consensus disorder prediction 47 68 - -
Mupr6291g00001 489 MobiDBLite consensus disorder prediction 1 68 - -
Mupr6291g00001 489 MobiDBLite consensus disorder prediction 1 33 - -
Mupr6291g00001 489 MobiDBLite consensus disorder prediction 110 138 - -
Mupr6291g00001 489 SUPERFAMILY Cyclin-like 219 353 IPR036915 -
Mupr6291g00001 489 ProSitePatterns Cyclins signature. 261 292 IPR006671 -
Mupr6291g00001 489 Gene3D - 244 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6291g00001 Mupr-Chr6291 1692 5046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6291g00001 7 489 Core Cell Cycle Gene Families AT1G44110 60.692 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6291g00001 K06627 - gmx:547781 782.711