Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6285g00001 AGACACAAAACACATACTCTTCTATCTCATGGTCATGATGCAAAAGCATTAGCATCAAGCTCCATGCACCCCATGGAAAGTGTCTTCTCTCTCCCTGTAACCGCCAGGGCTGAGTTTATCCAAATTCTGGTGCAGTCTTTTGGCTGCAGTTACATTTGTCTATGGGCATATGATTCCATTTCACCCAATCGTTTGCGCTTCTTGGATGGTTTCTACAATGTAAGAAACAACCAACCAAGCTCTAGTTTGGGGACTGTGGCACAGCAGCTATTCAGTCAGTTCCGGACTTTAACATTTGATGTCAATAATGATTGTGTTCCTGGACTAGCTTTTAGGAATCAGAGTCCCTACCTAGAGCTGCAACAATTGGAACTTCTGAGACTAGCATCCACAGAAATTCAAACACAATTCTTTCAGGAGGCAAGGATTCAGCTTTATCATGAACCAGGAATCTTATTTAAGTCACCGCTTGTGCCTTATTCTTCTCAGACTGCTGTTTTCATGGGGTGTAACAAAGGGGAAATTGAGCTTGGTTTCTTGAATATGTCCCAAGTTGACATTCAAACAGCACTAAGGAGTTTGTTTCCTGAAGATTTTTCTACCAGACAGTCTCAGCAAATTGATCAAAACCCACCAACATCATCTTCATCCTCTCTGAGATCAATATCCACCGGTAGCCCTGAAAGCTCATCTCTTCTGTTCAGTTCTATTCCAGGCTCTTCTCAGCCCCACTTTGCTGAGACCCTTGGAGGAGGAAGAGTGCCCCCAATGCAACCAGTGCCAAACACAGCCACTAGCACTCACCAACAAGCCATTCAAGCATTGACACAAGTCCCTCTAACCCAATTCCCCACACAAGAAGTTGAACATGATGCAATCATGAGAGCAATCCTTAATGTTATATCTCCAACCTCTCACCAGCACCAAAACTTGCCTTATGCTCCTGTGGTGCATCCAGAGGCTAGTGCTTTCCAGAGGTATAACCCAGACGTAGGTCCCAATATGGCGTCCAATTTCAGAAGGCTAAGCCTGATGAGGAGATCTTTTGCATTCTTTAGGAACTTAAATTTTATGAGAATGAGAGAACGCATTCAAGCAACATCCCGCACCACTAATACCCAGTTGCATCATATGATATCAGAGAGAAGAAGACGTGAGAAAATAAATGAGAATTTCCAAGCACTTAGAGCACTACTTCCTCCCGGAACAAAGAAAGACAAAGCGTCTATACTAATAGCAGCAAAGGAGACATTGAGCTCTTTGATGGCTGAAATTGATAAACTAAGCAAAACGAATCAAGGGTTGACGTCAATTTTGCCAGCCAAAGAATCCACAACTGAAGAAACCAAGGCTAGTTTATCATCAAATGAAAGATTAAACGTTCGAGTTTCACATGTACCCGAATCAAGCTCATCAGAAGAGCGAATGGTGGACTTGCAAGTGAATGTGAGAGGACAAATTTCTCAAATTGATTTATTAATCCGCTTGTTGGAATTTTTTAAACAGGCTCACCACGTGAGCTTGGTTTCCATGGACGCAAACACCCACATTGCAGAAGTGAATAATGTCCTTCATCAACTAACCTTCAGATTAAGGATTCAGGGAAGTGAATGGGACGAATCTAGCTTCCAGGAAGCAGTGAGAAGAGTGGTTGCTCACTTGGCACAGTACCAAGTGGACCAATAG 1686 0.43 RHKTHTLLSHGHDAKALASSSMHPMESVFSLPVTARAEFIQILVQSFGCSYICLWAYDSISPNRLRFLDGFYNVRNNQPSSSLGTVAQQLFSQFRTLTFDVNNDCVPGLAFRNQSPYLELQQLELLRLASTEIQTQFFQEARIQLYHEPGILFKSPLVPYSSQTAVFMGCNKGEIELGFLNMSQVDIQTALRSLFPEDFSTRQSQQIDQNPPTSSSSSLRSISTGSPESSSLLFSSIPGSSQPHFAETLGGGRVPPMQPVPNTATSTHQQAIQALTQVPLTQFPTQEVEHDAIMRAILNVISPTSHQHQNLPYAPVVHPEASAFQRYNPDVGPNMASNFRRLSLMRRSFAFFRNLNFMRMRERIQATSRTTNTQLHHMISERRRREKINENFQALRALLPPGTKKDKASILIAAKETLSSLMAEIDKLSKTNQGLTSILPAKESTTEETKASLSSNERLNVRVSHVPESSSSEERMVDLQVNVRGQISQIDLLIRLLEFFKQAHHVSLVSMDANTHIAEVNNVLHQLTFRLRIQGSEWDESSFQEAVRRVVAHLAQYQVDQ 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6285g00001 561 SMART finulus 378 427 IPR011598 GO:0046983
Mupr6285g00001 561 Gene3D - 370 446 IPR036638 GO:0046983
Mupr6285g00001 561 MobiDBLite consensus disorder prediction 200 269 - -
Mupr6285g00001 561 Pfam Helix-loop-helix DNA-binding domain 376 421 IPR011598 GO:0046983
Mupr6285g00001 561 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 372 421 IPR011598 GO:0046983
Mupr6285g00001 561 Coils Coil 411 431 - -
Mupr6285g00001 561 CDD bHLH_AtbHLH_like 377 429 IPR045239 -
Mupr6285g00001 561 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 129 552 IPR044658 -
Mupr6285g00001 561 MobiDBLite consensus disorder prediction 200 243 - -
Mupr6285g00001 561 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 370 435 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6285g00001 Mupr-Chr6285 2157 6295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6285g00001 36 555 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 40.399 2.06e-97 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr6285g00001 HLH 1.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6285g00001 - - gmx:100807098 772.696