Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6283g00001 ATGGTCAACGACAACTCTGACAACAACATGATCAAGAATGGCGGTGGCCTCACCATGCAGTACGTGAACAATGTTATCATCCATGGAATTCACATCAAGAAAATCATGTCCAAAGATGGCGGCATGATTAGGGACTCCTACAACCACTTTGGGTTGAGGGCAAGGAGTGACGACGATGTCATCTCCCTATTTGGAGCCTCAAACATTTGGATAGATCATATTTCCCTCTTTAGCTCTACTGATGGTCTTATCGATGTCATCATGGGCTCCACCGCCATCACCATCTCAAATTTCCACAGGACCAAACATAACAATGTGATACTATTTGGGGCCAGATACCAACACCAAGAAATAACGAGCTAA 363 0.4435 MVNDNSDNNMIKNGGGLTMQYVNNVIIHGIHIKKIMSKDGGMIRDSYNHFGLRARSDDDVISLFGASNIWIDHISLFSSTDGLIDVIMGSTAITISNFHRTKHNNVILFGARYQHQEITS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6283g00001 120 Gene3D - 5 120 IPR012334 -
Mupr6283g00001 120 SMART amb_all 1 120 IPR002022 -
Mupr6283g00001 120 Pfam Pectate lyase 8 111 IPR002022 -
Mupr6283g00001 120 SUPERFAMILY Pectin lyase-like 7 115 IPR011050 -
Mupr6283g00001 120 PANTHER PECTATE LYASE 18-RELATED 9 116 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6283g00001 Mupr-Chr6283 4831 5269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6283g00001 11 115 Polysaccharide Lyase AT1G14420 61.905 2.87e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6283g00001 K01728 - gmx:100785801 158.303