Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6278g00011 ATGGATGTTCAAGTGATAAACGTGGAAGGAAGTGGTCATCAAACTAAGGCAGATGATGGGGATGCAGAACCAAGTGATGGTGAAGTTAATAATGCTGAAAACTATGGATCTCATGTTGAGGATGGGATTTCTGAGCCATACTTGGGTATGGAATTTGACTCTGTAGATGTTGCTAAGACTTTCTATAATGACTATGCCAGACACATGGGTTTTAGCTCTAAAGTTGGCCCATATGGTCGCTCTAAAGCTGATGGGGAAAATATGTATCGGGAGTTTGTGTGTGGTAGGGAAGGTTCGAAAAAAAGGCTAAATGAAAGTTGCAATGCAATGATTAGGATTGAGCTAAAGGGTCAAAATAAATGGGTTGTAACAAAATTTGTGAAGGAGCATAGTCATTCCATGGTGAGTTCCAGTAAGACGCACAATAATCGTCCTTGTAAGCATTTTTCCAGTGTTGGAAGGACAATGCCTGAAACTTATCAAGGAGTTGGTCTTGTTCCCAGTGGTGTCATGTATGTATCTATGGATGGGAATCGTGTTTCGAGTCAGAACACTCGTGGGATGAGGAATATTCATACTGCTGCTGCTGAACGGAGTCACCCAGTTAAAAATTCCACATTGATGAATTATACTGTTAGGCCTTCTTTTCAAAACAGAACATTGGGGAGGGATGCTCATAATCTGCTGGAGTATTTTAAGAAGATGCAGGCTGAGAACCCTGGTTTCTTCTATGCTATACAACTTGATGAAGACAATCGTATGTCTAATGTCTTTTGGGCAGATGCAAGATCAAGGACAGCATACAGTCATTATGGTGACACAGTTCATCTGGACACAACATACAAAGTAAATCAATATAGAGTGCCATTTGCCCCTTTTACTGGGGTAAACCATCATGGTCAAATGGTTTTGTTTGGTTGTGCACTCCTTTTGGATGATTCTGAGGCATCTTTTTTATGGCTCTTGAAGACATTTCTGACAGCAATGAATGATCGTCAACCTGTCTCTATAACTACCGATCAAGACAGAGCCATGCAGACAGCAGTTTCTCAAGTTTTCCCACAAGCTCGCCACTGTATTAGCATGTGGCATATCTTGAGAGAAGGCCAGGAAAAGTTGGCCCATGTATGTCTTGCACATCCAAATTTTCAGGTTGAACTTTATAATTGTATTAACTTGACAGAAACCATTGAGGAGTTTGAGTCATCTTGGAATTTTATCCTTGATAAATATGAACTCAGAAGAAATGATTGGCTTCAGTCATTGTATAATGCTCGTGCTCAATGGGTTCCAGCATACTTCCGTGATTCGTTTTTTGCAGCAATATTTCCTACTCAAGGATTTGATGGTTCTTTTTTTGATGGTTATGTCAACCAACAGACGACATTGCCATTGTTCTTCAGGCAGTATGAAAGAGCTTTAGAGAGCTGGATTGAAAAGGAAATAGAAGCAGATTTTGAGACAGTTAGCACGACACCAGTTTTGAAGACACCTTCACCAATGGAGAAACAGGCTTCTAATCTTTATACAAGAAAAATATTTTTGAAGTTTCAAGAAGAGCTTGTTGAAACTTTTGTTTATACCGCAAATAGAATTGAAGGAGATGGGCCAATTAGCACATTTAGAGTTGCAAAATTTGAGGATGACCAAAAGGCATATATGGTAACATTAAACCATTCTGAGTTGAAAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTTTGCAGGCATGTTTTAACAGTCTTCACTGTGACAAATGTACTTACATTACCACCCCATTACATTTTAAAACGGTGGACAAGGAACGCAAAAAGCAGTGCTGGATCAGATGAACATACCAGTGAATCACATGCACAGGAGTCTTTGACAGCAAGGTATGGCAATCTATGTAAGGAAGCCATCAGATATGCTGAGGAAGGGGCAGTAACTGTAGAAACTTATAATGCTGCAATAAGTGGTCTTAGAGAAGGTGGAAAGAAGGTTGCTACTGTGAAAAGAAGTGTTGCCAAAGTTACACCTAATAATCAGGTCAGTGGGACTGCTTATGATGACAGGAAAATTCCTACCCCAACTTTGGATACAACGCCTCTTCTATGGCCGCGGCAAGATGAAATAACAAGGAGGTTTAATCTTAATGATGCTGGTGGTCCTGTTCAATCAGTTGCTGATCTAAATTTGCCACGGATGGCCCCAGTCTCTCTTCATCGAGATGATGGTCCATCTGAAAACATGGTAGTTCTTCCATGCCTAAAATCAATGACATGGGTGATGGAGAACAAGAACTCAACTCCAGGGAATAAAGTCGCTGTTATCAATCTGAAGTTGCAAGATTATAGCAGGGCTCCTTCTACAGAATCTGAGGTTAAGTTTCATCTGTCAAGAGTTACTTTGGAACCAATGTTGAAGTCTATGGCTTACATCAGTGAACAGCTCTCAACGCCAGCTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACCTCTGGTGAGTCAGAAGTAAAGTTTCAGGTGTCCAGGGATACACTGGGTGCTATGCTACGATCAATGGCCTATATCCGTGAGCAGCTTTCTCATGCTGTAAGTGTTCCGTTCCTAGCAAAGAAACCAAGTTCATCATCCATCTGCATATCTGATAAGGAAACTCCCTTCAAGAAAACCATTTTTCAGTTGAACCTGTAA 2700 0.4048 MDVQVINVEGSGHQTKADDGDAEPSDGEVNNAENYGSHVEDGISEPYLGMEFDSVDVAKTFYNDYARHMGFSSKVGPYGRSKADGENMYREFVCGREGSKKRLNESCNAMIRIELKGQNKWVVTKFVKEHSHSMVSSSKTHNNRPCKHFSSVGRTMPETYQGVGLVPSGVMYVSMDGNRVSSQNTRGMRNIHTAAAERSHPVKNSTLMNYTVRPSFQNRTLGRDAHNLLEYFKKMQAENPGFFYAIQLDEDNRMSNVFWADARSRTAYSHYGDTVHLDTTYKVNQYRVPFAPFTGVNHHGQMVLFGCALLLDDSEASFLWLLKTFLTAMNDRQPVSITTDQDRAMQTAVSQVFPQARHCISMWHILREGQEKLAHVCLAHPNFQVELYNCINLTETIEEFESSWNFILDKYELRRNDWLQSLYNARAQWVPAYFRDSFFAAIFPTQGFDGSFFDGYVNQQTTLPLFFRQYERALESWIEKEIEADFETVSTTPVLKTPSPMEKQASNLYTRKIFLKFQEELVETFVYTANRIEGDGPISTFRVAKFEDDQKAYMVTLNHSELKANCSCQMFEYSGILCRHVLTVFTVTNVLTLPPHYILKRWTRNAKSSAGSDEHTSESHAQESLTARYGNLCKEAIRYAEEGAVTVETYNAAISGLREGGKKVATVKRSVAKVTPNNQVSGTAYDDRKIPTPTLDTTPLLWPRQDEITRRFNLNDAGGPVQSVADLNLPRMAPVSLHRDDGPSENMVVLPCLKSMTWVMENKNSTPGNKVAVINLKLQDYSRAPSTESEVKFHLSRVTLEPMLKSMAYISEQLSTPANKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHAVSVPFLAKKPSSSSICISDKETPFKKTIFQLNL 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6278g00011 899 MobiDBLite consensus disorder prediction 1 37 - -
Mupr6278g00011 899 SMART 26again6 564 591 IPR006564 GO:0008270
Mupr6278g00011 899 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Mupr6278g00011 899 Pfam SWIM zinc finger 559 587 IPR007527 GO:0008270
Mupr6278g00011 899 Pfam MULE transposase domain 275 367 IPR018289 -
Mupr6278g00011 899 Pfam FAR1 DNA-binding domain 60 135 IPR004330 -
Mupr6278g00011 899 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 665 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6278g00011 Mupr-Chr6278 46697 54592 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mupr6278g00011 MULE 7.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6278g00011 - - gmx:100786516 1627.07