Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6277g00001 ATGGCCAATCTTCCCGCAACAAAGTCCACCACGACGACGCCGTCTCAGGAGAAACGACACCGTTCTATCTTCGAACTTCCATCCAACTTCTTCGACTCTTGTCGCCTTCTCCCTTCTCCTCACTCATCCGTTTCCGACCACCACAGCGTAGGTCAAACCCTCCAACCATCCTCAAACGACGTCGTCGTTGTCGACGCCCCTCAAAACGCTGTCGTTTCCGCGCCTAGGTGGACCTGCAATACCTGCAAGACTCAATTCGATTCCCTCCAAGACCAGCGTTCCCATTTCAAATCCGACATTCATCGATTCAACGTGAAGCTGACAGTTGCTGGAAAGAATATTGTGAAGGAAGAAGATTTTGAGGTGCTGACATCTGAATTTGTCAAGGACTATGATGTGTCAAGTATATCTGGATCAGAAAGTGATGATGATAGTGAAATTGAGTCTCAGAGTCAAAATGTAGTGCATGACAAATTGAGCGGTTATAAACAAAAGCTATTCTTTCGTCTTCAGACAGGGCAGAGAGTTTCTGTCTGGAAGTGCTTGATTATGAATGTGACTGAAAATGTATTGTATGAAAATGAGAAAGTGGAGAACGAAGTGGTTGAGAAGTTGAAATCTCTGTCTGTTGAGCCCAGAGATAGTACCCATTTGAGGATCGTTCTGCTTGTGTCGGGTGGGCATTTTGCAGGTTGTGTCTTTGATGGTGATGCTGTTGTGGCTCACAAGACATTTCACAGATATGTTGTAAGGGCCAAGGCAGGAAAAAAACAATCATCTAAAGATGCTTCTGGCAGGGCTGCACATTCTGCTGGGGCTTCACTTCGTCGTTATAATGAACTTGCTTTAAAGAAGGAAGTTCAAGAACTGCTTACTGCTTGGAAACCTTATTTTGATGCTTCCAATTGCATTTTTATACATGCACCTTCAAGTAGTCGTCAATTGCTTTATGATGGAGAAAGATCATATTTTACCAATCATCAGAGTGTTATTAGAAATATTGCTTTGAGTGTTAGGAGGCCTACTTTCAGGGAAGCAAAGCGAGTATATAGCCAGTTGACCCAGGTAACCTATGAAGCAGATGAGAAGGAAGTTTTACAAAGTAATCAAGAGGATTTGGTATCAATTCACATTTCTAAAATAAATCGCAGTCCAACCTCCAGCAAAGGGGACATGGCGGAATTGGATGGCAAAGATAAAGATGAAGCTTTTTCAAGTAAACAAAATGACGAACTCCCCATTTTGAGTAATGGAGAAAGTGAGAATGAGCTATCTGGTCAGACAACTCCTTTACATCAAGCAGCACAATCTGATGACTCTCTAAAGGTTTTGGAGCTCCTGGAACAAGGCTTGGATCCTTGCATCAAAGATGAAAGGGGGCGGACCCCATATATGTTGGCACATGACAAAGAAGTTAGGAATACTTTCAGAAGGTTTATGGCGTCAAATCTTGACAAATGGGATTGGCATGCTGCAAAAGTGCCGAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCTAAGAGAAAAGCTAGAGCAAAAGAATTGAAGAAATTGCGGAAAGCAAAAGAAAAGAAGGCTCAGGCTGAAGCCACCTTGCCTAAGAATGATTCCAAAACTGTAGAGACAACATCTATTAAGGGACAATCTCTACTAAAAAGTGGTGTGCAATTATCTAAAGAGGACCAAATAAGAATGGCACAGGCTGCTGAAAGAGAAAAGAGAGCAGCTGCTGCAGAGAAGAGAATAGCTGCCCTCAAAATCCAAGCTAATAATGCAACCGCTGCGTCTAGCACGTCAGAACCTAAAAGTGGATTAGCCGGTGACATTTGTTGTTCCTGTTGTAATTCATCACTTGCTGGTAAAGTTCCCTTCCACCGGTATAATTACAAATACTGCAGCACATCATGCATGCATATTGCTCCGAATATCCCATTGTTCTTGATTTGGTTGCACGTAATCTTGGTTGGGAAAGGGAAAGAAATAAGGAGGGGTGGGGAGCAGCCATGGTGGGAGGGCTCAATGGCCTCAAGGGTTCGTGAATCCTCTGGTCTCAGGGAGGTGACATAA 2094 0.4336 MANLPATKSTTTTPSQEKRHRSIFELPSNFFDSCRLLPSPHSSVSDHHSVGQTLQPSSNDVVVVDAPQNAVVSAPRWTCNTCKTQFDSLQDQRSHFKSDIHRFNVKLTVAGKNIVKEEDFEVLTSEFVKDYDVSSISGSESDDDSEIESQSQNVVHDKLSGYKQKLFFRLQTGQRVSVWKCLIMNVTENVLYENEKVENEVVEKLKSLSVEPRDSTHLRIVLLVSGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRYNELALKKEVQELLTAWKPYFDASNCIFIHAPSSSRQLLYDGERSYFTNHQSVIRNIALSVRRPTFREAKRVYSQLTQVTYEADEKEVLQSNQEDLVSIHISKINRSPTSSKGDMAELDGKDKDEAFSSKQNDELPILSNGESENELSGQTTPLHQAAQSDDSLKVLELLEQGLDPCIKDERGRTPYMLAHDKEVRNTFRRFMASNLDKWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEATLPKNDSKTVETTSIKGQSLLKSGVQLSKEDQIRMAQAAEREKRAAAAEKRIAALKIQANNATAASSTSEPKSGLAGDICCSCCNSSLAGKVPFHRYNYKYCSTSCMHIAPNIPLFLIWLHVILVGKGKEIRRGGEQPWWEGSMASRVRESSGLREVT 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6277g00001 697 Gene3D - 389 488 IPR036770 -
Mupr6277g00001 697 MobiDBLite consensus disorder prediction 503 554 - -
Mupr6277g00001 697 MobiDBLite consensus disorder prediction 409 433 - -
Mupr6277g00001 697 SUPERFAMILY Ankyrin repeat 425 481 IPR036770 -
Mupr6277g00001 697 Pfam Bacteroidetes VLRF1 release factor 220 358 IPR041175 -
Mupr6277g00001 697 Coils Coil 568 604 - -
Mupr6277g00001 697 Coils Coil 502 540 - -
Mupr6277g00001 697 ProSiteProfiles Ankyrin repeat profile. 426 458 IPR002110 GO:0005515
Mupr6277g00001 697 MobiDBLite consensus disorder prediction 403 433 - -
Mupr6277g00001 697 MobiDBLite consensus disorder prediction 505 519 - -
Mupr6277g00001 697 Pfam Vms1-associating treble clef domain 620 646 IPR041540 -
Mupr6277g00001 697 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 15 648 IPR047139 -
Mupr6277g00001 697 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6277g00001 18 603 C2H2 Transcription Factor Family AT1G01930 54.380 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6277g00001 K26089 - gmx:100527709 1003.05