Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr6271g00005 | ATGAATTTCCCTTACCTCACTAGCTTCCCCGAACGTGTCCTTGCTCCTCTCTATGCCACAGTTCCCGCTACCGCTATCAGGGGCAATAGAGCGGAGAGTTTTGCAATTGAAGGGCGTAATCTGAAGTTCTCGTTCAGGACGAGGCAAACACAGGATGTACCGGTTCTTAGGGATTGTTCGATTCGCATTCCTTGCGGGCAGTTTTGGATGCTTCTTGGACCCAACGGGTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTCTTGACTCCAACTTCAGGAACAGTGTACGTGGAGGCCCCTAAAAGTTTCGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACTGTAGATTCTGATGTTGCATTTGGTCTCGGTAAGATCAATTTGACCCATGATGAAGTCAGATCTAGGGTATCAAGAGCTTTGCAAGCTGTAGGCCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTTGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTTGGGGTTATCAAGGCTGTTAGGAACTCTGTGGATACTTCTGCAGAAGTTACGGCATTATGGGTCACCCATCGATTGGAAGAACTACAGTATGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTTGTCATGCATGGAGATGCCGCTAGCATTAGGAGTTTCATTGAAGCCAGGCAATCTGCCTATATTAACCAGATTAATTCTTAA | 798 | 0.4637 | MNFPYLTSFPERVLAPLYATVPATAIRGNRAESFAIEGRNLKFSFRTRQTQDVPVLRDCSIRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVYVEAPKSFVFQNPDHQVVMPTVDSDVAFGLGKINLTHDEVRSRVSRALQAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSVDTSAEVTALWVTHRLEELQYADGAIYMEDGKVVMHGDAASIRSFIEARQSAYINQINS | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr6271g00005 | 265 | CDD | ABC_cobalt_CbiO_domain1 | 37 | 238 | IPR015856 | GO:0005524|GO:0016020|GO:0055085 | |
Mupr6271g00005 | 265 | FunFam | ABC transporter I family member 10 | 32 | 262 | - | - | |
Mupr6271g00005 | 265 | Pfam | ABC transporter | 56 | 188 | IPR003439 | GO:0005524 | |
Mupr6271g00005 | 265 | ProSitePatterns | ABC transporters family signature. | 161 | 175 | IPR017871 | GO:0005524|GO:0016887 | |
Mupr6271g00005 | 265 | SMART | AAA_5 | 65 | 228 | IPR003593 | GO:0016887 | |
Mupr6271g00005 | 265 | PANTHER | ABC TRANSPORTER I FAMILY MEMBER 10 | 36 | 250 | - | - | |
Mupr6271g00005 | 265 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 32 | 253 | IPR027417 | - | |
Mupr6271g00005 | 265 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 36 | 261 | IPR003439 | GO:0005524 | |
Mupr6271g00005 | 265 | Gene3D | - | 31 | 264 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr6271g00005 | Mupr-Chr6271 | 32013 | 34764 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr6271g00005 | 36 | 243 | Calmodulin-binding Proteins | AT2G36910 | 29.646 | 2.08e-21 | 91.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr6271g00005 | - | - | pvu:PHAVU_009G150700g | 480.715 |