Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6271g00005 ATGAATTTCCCTTACCTCACTAGCTTCCCCGAACGTGTCCTTGCTCCTCTCTATGCCACAGTTCCCGCTACCGCTATCAGGGGCAATAGAGCGGAGAGTTTTGCAATTGAAGGGCGTAATCTGAAGTTCTCGTTCAGGACGAGGCAAACACAGGATGTACCGGTTCTTAGGGATTGTTCGATTCGCATTCCTTGCGGGCAGTTTTGGATGCTTCTTGGACCCAACGGGTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTCTTGACTCCAACTTCAGGAACAGTGTACGTGGAGGCCCCTAAAAGTTTCGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACTGTAGATTCTGATGTTGCATTTGGTCTCGGTAAGATCAATTTGACCCATGATGAAGTCAGATCTAGGGTATCAAGAGCTTTGCAAGCTGTAGGCCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTTGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTTGGGGTTATCAAGGCTGTTAGGAACTCTGTGGATACTTCTGCAGAAGTTACGGCATTATGGGTCACCCATCGATTGGAAGAACTACAGTATGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTTGTCATGCATGGAGATGCCGCTAGCATTAGGAGTTTCATTGAAGCCAGGCAATCTGCCTATATTAACCAGATTAATTCTTAA 798 0.4637 MNFPYLTSFPERVLAPLYATVPATAIRGNRAESFAIEGRNLKFSFRTRQTQDVPVLRDCSIRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVYVEAPKSFVFQNPDHQVVMPTVDSDVAFGLGKINLTHDEVRSRVSRALQAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSVDTSAEVTALWVTHRLEELQYADGAIYMEDGKVVMHGDAASIRSFIEARQSAYINQINS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6271g00005 265 CDD ABC_cobalt_CbiO_domain1 37 238 IPR015856 GO:0005524|GO:0016020|GO:0055085
Mupr6271g00005 265 FunFam ABC transporter I family member 10 32 262 - -
Mupr6271g00005 265 Pfam ABC transporter 56 188 IPR003439 GO:0005524
Mupr6271g00005 265 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524|GO:0016887
Mupr6271g00005 265 SMART AAA_5 65 228 IPR003593 GO:0016887
Mupr6271g00005 265 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 36 250 - -
Mupr6271g00005 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 253 IPR027417 -
Mupr6271g00005 265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 261 IPR003439 GO:0005524
Mupr6271g00005 265 Gene3D - 31 264 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6271g00005 Mupr-Chr6271 32013 34764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6271g00005 36 243 Calmodulin-binding Proteins AT2G36910 29.646 2.08e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6271g00005 - - pvu:PHAVU_009G150700g 480.715