Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6258g00004 ATGAGGACCCGTTTAGCCTCCACTCGGGTTATCTTCGTGGCCTCGCTCTGTTTCTTCGCGGGCTTCTTAGAATTGGAAGCCAAAACCATCGACCCCTACAAGGTTCTTGGGGTTGATAAAAATGCAAATCAGCGGGAAATTCAGAAGGCCTTTCACAAGCTATCTCTCCAATATCATCCTGACAAGAACAAAGCCAAGGGTGCACAAGAGAAGTTTGCTCAAATCAATAATGCATATGAGATTTTATCTGATGAAGAGAAGAGAAAGAATTATGATATGTATGGAGATGAGAAAGGAAATCCTGGATTTCGAGGTGGCCATCCTGGAGGTCAGGGTGGATATACTTATTTTACAGGGGGTGGTCCTGGACGAAGCCGTTTTAACTTCAAACCAGGGGGGGACTGGCAGGGTATGGGTGGGCAGGGAGGATCTAAGTCATTTTCCTTTTCCTTTGGTGGCTCGGGTGATTCAAATCCTTTTGGATTTGGCATGGATGATCTTTTTGGTGGTTTCTTTGGTGGTGGTGGTGGTGGTGGTGGGAGACAGTTTGGAGGTTTTGGCCGTTCAACTGGTTCCCAATCTGCGTCCAAGAGTTTTCCCAAAAGTCTTAGAGCTATAAATTCACGTATCTACAAGAAAGAAATTGACAATGCAGGGATGACTTGGCTTTTGTTATCTTATAAACCCTCATCGAAGGAGATTCAATACTTTGAATCCACTATAGAGGAGGTTGCCAGTCCATTGCAGGGAGCTTTAAAGGTTGGAAGCATTAACTGTGAAAAGGAGGTGTCATTCTGTAGAGAGCTTGGCATATATCCGCGCAGAGCTCCAAGGCTTTTTGCCTTTTCTTACAAGGAGAATGAAAAGGGTTCTTTGGTGGAGTACAGTGGAGACTTGGCTGTTAAGAATTTGAAGGCTTTCTGTCAAGAACACTTGCCAAGGTTTTCAATACGGACCGACCTGAATCATCTCCATCAATTCAGCACTACTGGAAAGTTGCCTAGGGTGCTGCTTCTCTCCACCAAGAAGGACACTCCGGTAATTTGGCGTGTTCTTAGTGGTTTGTATCACAATCGCATTACTTTCAGTGATGCAGAGGTTCATGATCTTTCTGATCCAAGAGTGAAAGAGCTAGGAGTTGATGCACTTCCAGCTATTGTAGGTTGGCTACCTAACGGAGAAAAGCAGGTTCTGAAAACTGGGATTTCTGTAAAAGATTTAAAATCTGCCGTTCTTGATCTTAGTAACATACTTGATAATTTTGAAAAAGTGAGTAATAAGGAAGCATCAGGTGAGGGCAAGAAGGCACAAACTGACTCAGACGAGGGACACATTCCATTACTTTCTCGGTCAAATTTTAAGTCTCTCTGTGGTGAGAAAACTCCTGTCTGTATAATTGGTGCCTTCAGGTCTTCTAAAGCCAGAGAAAACCTAGAATCAATTCTCTCTTGGGTGTCTCAAAAATCTTTGTCAAGACAACCAAATCATGGAGGCAGCAGCTCTAGGGACTCAATTTCCTATGCCATGTTGGATGCTGCAGAGCAAAAGTCATTTCTAAAAGCATTTGAGAAAACAGGTTATAAATCATCAAGTGAGTTGTTAATTGCCTACAAACCCAGAAGAGAAAAGTACAGTGTATATAAGGGTGAAATGACAATAGAGGAGATAGAGAATTTCATCAGCTCCGTTCTCAGTGGAGATATACCCTTCAGAGAAACACGTGGGAAGCCTGTACTCATTTGCTCATAA 1749 0.4305 MRTRLASTRVIFVASLCFFAGFLELEAKTIDPYKVLGVDKNANQREIQKAFHKLSLQYHPDKNKAKGAQEKFAQINNAYEILSDEEKRKNYDMYGDEKGNPGFRGGHPGGQGGYTYFTGGGPGRSRFNFKPGGDWQGMGGQGGSKSFSFSFGGSGDSNPFGFGMDDLFGGFFGGGGGGGGRQFGGFGRSTGSQSASKSFPKSLRAINSRIYKKEIDNAGMTWLLLSYKPSSKEIQYFESTIEEVASPLQGALKVGSINCEKEVSFCRELGIYPRRAPRLFAFSYKENEKGSLVEYSGDLAVKNLKAFCQEHLPRFSIRTDLNHLHQFSTTGKLPRVLLLSTKKDTPVIWRVLSGLYHNRITFSDAEVHDLSDPRVKELGVDALPAIVGWLPNGEKQVLKTGISVKDLKSAVLDLSNILDNFEKVSNKEASGEGKKAQTDSDEGHIPLLSRSNFKSLCGEKTPVCIIGAFRSSKARENLESILSWVSQKSLSRQPNHGGSSSRDSISYAMLDAAEQKSFLKAFEKTGYKSSSELLIAYKPRREKYSVYKGEMTIEEIENFISSVLSGDIPFRETRGKPVLICS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6258g00004 582 Coils Coil 65 85 - -
Mupr6258g00004 582 Pfam DnaJ domain 31 92 IPR001623 -
Mupr6258g00004 582 Gene3D DnaJ domain 28 183 IPR036869 -
Mupr6258g00004 582 Gene3D Glutaredoxin 204 313 - -
Mupr6258g00004 582 SMART dnaj_3 30 87 IPR001623 -
Mupr6258g00004 582 SUPERFAMILY Thioredoxin-like 443 569 IPR036249 -
Mupr6258g00004 582 SUPERFAMILY Chaperone J-domain 28 120 IPR036869 -
Mupr6258g00004 582 ProSiteProfiles dnaJ domain profile. 31 95 IPR001623 -
Mupr6258g00004 582 PRINTS DnaJ domain signature 51 66 IPR001623 -
Mupr6258g00004 582 PRINTS DnaJ domain signature 33 51 IPR001623 -
Mupr6258g00004 582 PRINTS DnaJ domain signature 67 87 IPR001623 -
Mupr6258g00004 582 PRINTS DnaJ domain signature 87 106 IPR001623 -
Mupr6258g00004 582 CDD DnaJ 31 84 IPR001623 -
Mupr6258g00004 582 SUPERFAMILY Thioredoxin-like 207 312 IPR036249 -
Mupr6258g00004 582 ProSitePatterns Nt-dnaJ domain signature. 72 91 IPR018253 -
Mupr6258g00004 582 PANTHER DNAJ PROTEIN ERDJ3A 2 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6258g00004 Mupr-Chr6258 38920 42490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6258g00004 33 94 C2H2 Transcription Factor Family AT1G74250 41.176 1.31e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6258g00004 - - gmx:100785691 869.381