Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6241g00011 ATGATGGGGAGAATAGCATGCAGTGATGAGAGTGGTTTGAAGAAGGGACCTTGGACCCCAGAAGAGGATAGAATATTGGTGGATTACATTCAGAAAAATGGGCATGGGAGTTGGAGAGCACTTCCAAAACTTGCAGGATTAAACAGGTGTGGGAAGAGTTGCAGGCTAAGGTGGACTAACTATCTGAGGCCTGATATCAAAAGAGGAAAATTCTCTGAGGATGAAGAGCAGCTCATCATCAATTTACATGCAGCTCTTGGGAACAAGTGGTCGGCTATAGCAGGTCATTTGCCAGGTAGGACTGATAATGAAATAAAGAATTTCTGGAACACTCATTTAAAGAAAAAGCTTCTTCAAATGGGTTTAGATCCAGTGACTCATCGTCCAAGATTAGATCACCTTAATCTTCTATCCAATCTCCAACAGTTGCTGGCTGCTACAAACATTGTCAGTAATTTCACTAACACTTGGGACATCAATGCTCTAAGGCTGCAATCAGATGCCACACAAATAGCCAAACTCCAATTGCTGCAAAACATACTCCAAGTCCTTGGGGGCAGTCCTACCTCAAACTTGGAGCTACTCAATCCTTTTGGACCATCATCTTCACTCCCACATGGTTTTCTAAATGAAGTTTTAGGATTGAATCAGTCTAAGCTCCAAAATCTTTATAATGGTTGTTCTACTAGTTTTCCTTCTCAAAATCAGCCAAATTTCCAAAGCTTTGAAGCCCCTCAACCATATCACCACATGAATGGTGCTAGCAATAGTAGTTGCATGAAATCTGAAAAGGTTGATGAACAACTTGATGCCCCAAATTCTTCTTCAACACCATTCAGTTCTCTTCCAAATCTAGTTTCAGTCTCACCTGAATGTCCCACTGTCAAGCAAATGGAAAACAATGGAAACCCAAATGAGAGCTCTGACCCTTCTTCCCCTTCAACCACCTTTGAAATGTGGGGAGATTTCATGTACGAGGACGTAAGCGATGCTTATTGGAAAGATCTCATAGAGTAA 1017 0.4159 MMGRIACSDESGLKKGPWTPEEDRILVDYIQKNGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSEDEEQLIINLHAALGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLLQMGLDPVTHRPRLDHLNLLSNLQQLLAATNIVSNFTNTWDINALRLQSDATQIAKLQLLQNILQVLGGSPTSNLELLNPFGPSSSLPHGFLNEVLGLNQSKLQNLYNGCSTSFPSQNQPNFQSFEAPQPYHHMNGASNSSCMKSEKVDEQLDAPNSSSTPFSSLPNLVSVSPECPTVKQMENNGNPNESSDPSSPSTTFEMWGDFMYEDVSDAYWKDLIE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6241g00011 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mupr6241g00011 338 MobiDBLite consensus disorder prediction 235 262 - -
Mupr6241g00011 338 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mupr6241g00011 338 FunFam MYB-related transcription factor 14 67 - -
Mupr6241g00011 338 Gene3D - 14 67 - -
Mupr6241g00011 338 Gene3D - 70 117 - -
Mupr6241g00011 338 MobiDBLite consensus disorder prediction 269 315 - -
Mupr6241g00011 338 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mupr6241g00011 338 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mupr6241g00011 338 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mupr6241g00011 338 FunFam Transcription factor MYB39 70 131 - -
Mupr6241g00011 338 CDD SANT 70 113 IPR001005 -
Mupr6241g00011 338 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mupr6241g00011 338 MobiDBLite consensus disorder prediction 235 315 - -
Mupr6241g00011 338 SMART sant 14 64 IPR001005 -
Mupr6241g00011 338 SMART sant 67 115 IPR001005 -
Mupr6241g00011 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Mupr6241g00011 338 CDD SANT 17 62 IPR001005 -
Mupr6241g00011 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6241g00011 Mupr-Chr6241 36446 37603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6241g00011 2 338 MYB Transcription Factor Family AT5G16770 50.142 3.53e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6241g00011 Myb_DNA-binding 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6241g00011 K09422 - gmx:547488 536.954