Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr623g00008 ATGGAAGAACCTATTGTGGTGAACAAAGGTGAAGAGCCTCTAGATTTGCCTCCAGGTTTCAGGTTCCACCCTACTGATGAGGAGATAATTACTTATTATCTCACTGAGAAGGTGAAGAATAGTAGTTTCAGTGCAATTGCAATTGGAGAGGCTGATTTGAACAAGTGTGAGCCATGGGATTTACCAAAGAAAGCCAAGATAGGGGAGAAAGAGTGGTACTTCTTCTGCCAAAAGGATAGGAAGTATCCAACTGGCATGAGAACCAATAGAGCAACAGAATCTGGGTACTGGAAGGCCACAGGAAAAGATAAGGAAATTTACAAAGGGAAAGGGAACCTTGTGGGGATGAAGAAGACCCTTGTGTTCTATAGAGGGAGAGCTCCAAAGGGGGAGAAGACCAATTGGGTCATGCATGAATTCAGATTGGAGGGCAAATTTGCAAGTTACAACCTTCCTAAGGCAGCAAAGGATGAATGGGTTGTCTCAAGGGTTTTTCACAAGACAACAGATGTCAAAAAGACCTCAATTCCTGGCCTCTTGAGGATAAACTCTATTGGGGATGATCTTCTTGATTACTCTTCACTCCCACCTCTCATGGATCCTCCTTATGGCAACACCAACACCAACAACACCACTAACCCTCTTTCATCAACTAAACCACAATCAGAGGGTTATTATCTTCCCAGTTTCTCCATCAACAACCACCAGCAGCTTCTCATCAAGCCAGAAGACCATCACAGAACCTTTGAGATTCCCACAATTAACTACACTCAACCCAATCTCAGCATGGGAAACGACACACTCTCACAGCCCCTAAACGTGTTCACTGATTACTATGCGCACCAAAACAGGATCATCAAAAGTTCCATCACGCTACCCTCGGGCTTTGGAACCAACAACAACATTATCAACAACCACGAAGAAGCTATCCTAAGAGCATTCGCAGCCAAGAACAACGACCACTCAGGCGGCTTCGACAAACAGTGCAAGATGGAGCAATTCTCTTCTAACCACTCACAAGACACAGGCCTAAGCAACGACAGAAACACTGACACATCCTCGGTGGTCTCGAAGCAAGACAACAACAACAACAACATGGGAAGAAATAATAGGGCTTTGTACGAGGATCCTTCTTCAGTTGCACCTCTCTCAGATTTGGAATGCCTCCAGTGGGATGATGACTACTGA 1188 0.4487 MEEPIVVNKGEEPLDLPPGFRFHPTDEEIITYYLTEKVKNSSFSAIAIGEADLNKCEPWDLPKKAKIGEKEWYFFCQKDRKYPTGMRTNRATESGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFASYNLPKAAKDEWVVSRVFHKTTDVKKTSIPGLLRINSIGDDLLDYSSLPPLMDPPYGNTNTNNTTNPLSSTKPQSEGYYLPSFSINNHQQLLIKPEDHHRTFEIPTINYTQPNLSMGNDTLSQPLNVFTDYYAHQNRIIKSSITLPSGFGTNNNIINNHEEAILRAFAAKNNDHSGGFDKQCKMEQFSSNHSQDTGLSNDRNTDTSSVVSKQDNNNNNMGRNNRALYEDPSSVAPLSDLECLQWDDDY 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr623g00008 395 MobiDBLite consensus disorder prediction 334 372 - -
Mupr623g00008 395 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Mupr623g00008 395 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 319 - -
Mupr623g00008 395 MobiDBLite consensus disorder prediction 334 377 - -
Mupr623g00008 395 FunFam NAC domain-containing protein 100-like 25 171 - -
Mupr623g00008 395 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Mupr623g00008 395 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
Mupr623g00008 395 SUPERFAMILY NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr623g00008 Mupr-Chr623 35203 36684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr623g00008 1 203 NAC Transcription Factor Family AT5G18270 75.000 5.32e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr623g00008 NAM 3.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr623g00008 - - gmx:100784372 655.21