Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6237g00003 ATGGGGAGAGCTCCTTGCTGTGAGAAGGTGGGCTTGAAGAAAGGAAGATGGACTGCTGAAGAGGATAAGATCTTGACCAATTACATCCAAGAAAATGGTGAGGGATCATGGAGATCCTTGCCCAAGAATGCAGGTTTGCTAAGATGTGGGAAAAGTTGTAGACTGAGATGGATCAACTACTTGAGATCAGATGTGAAGAGAGGCAACATCACTCCTCAAGAAGAAGAGATCATTGTCAAGTTGCATGCTGTTCTCGGTAACAGGTGGTCTGTAATAGCTGGACACTTACCAGGTCGCACGGACAATGAAATAAAGAACTATTGGAATTCTCATTTGAGGAGAAAGATTTACTGCTTCATGAAGTCTTTAAATGAGTCTCACCCTCCCATTGACATGGCTGCTGTAAACGTAGCTGCTACTTCCAAGAGAAGAACCGGGGGAGGCACAAAAACTGATCAACCTGCCATGCAAGATAACAAGAACAACGTGGCTTATAGCCAAAACTCCTCAAAAAGTAGCCCAAGCCAAGTGCCTCAAGTTCAACCAATGCTTAAAAGAAGTGCAACTTCACAAAGTTTCAACGATGAGGAGAACACAACGGATTATAGTAATTTGGATTATGCTTATTGCTGTGAGATGGGGGACAACAACACATACGGCATGGAAGAGCTTGAGGCCTTGGGACCCTACGAATGGTTAGATGATGAAATTATGAAACTTAGTCACATGTTTGAAAATGGGGTGCTCGTAAACCAAGGTGGGGTTGTAGCCAATAATGAAGAGTGGCTTAGTAGGAATAACTATGGACTAGTGGAAGAGAGCAAGAGTGGTGTTTGGAGCACATCAAATGCAGAAAGTGGAGAGTGGAACACAAGCTCTTCGTCTGTGAATTCTGTGTATGACTATCATCAACATCAATGGCCTGATATGCATTTAGAAGGTAGTGTTCAATCCTATAATGCTTGGGATCTTTGTGAAGAAAACCAGAACATGACTTGCTTTTGGGGTACTACCAATAATGAAGGAAATGTTGGCTTTTATCAGTAA 1047 0.426 MGRAPCCEKVGLKKGRWTAEEDKILTNYIQENGEGSWRSLPKNAGLLRCGKSCRLRWINYLRSDVKRGNITPQEEEIIVKLHAVLGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMKSLNESHPPIDMAAVNVAATSKRRTGGGTKTDQPAMQDNKNNVAYSQNSSKSSPSQVPQVQPMLKRSATSQSFNDEENTTDYSNLDYAYCCEMGDNNTYGMEELEALGPYEWLDDEIMKLSHMFENGVLVNQGGVVANNEEWLSRNNYGLVEESKSGVWSTSNAESGEWNTSSSSVNSVYDYHQHQWPDMHLEGSVQSYNAWDLCEENQNMTCFWGTTNNEGNVGFYQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6237g00003 348 Gene3D - 71 116 - -
Mupr6237g00003 348 CDD SANT 16 61 IPR001005 -
Mupr6237g00003 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr6237g00003 348 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr6237g00003 348 FunFam Myb transcription factor 11 67 - -
Mupr6237g00003 348 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mupr6237g00003 348 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr6237g00003 348 FunFam Myb transcription factor 71 116 - -
Mupr6237g00003 348 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr6237g00003 348 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr6237g00003 348 Gene3D - 13 66 - -
Mupr6237g00003 348 CDD SANT 71 112 IPR001005 -
Mupr6237g00003 348 SMART sant 66 114 IPR001005 -
Mupr6237g00003 348 SMART sant 13 63 IPR001005 -
Mupr6237g00003 348 MobiDBLite consensus disorder prediction 163 199 - -
Mupr6237g00003 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr6237g00003 348 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6237g00003 Mupr-Chr6237 14914 16725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6237g00003 1 240 MYB Transcription Factor Family AT5G49330 56.017 8.67e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr6237g00003 Myb_DNA-binding 6.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6237g00003 K09422 - gmx:100805532 551.592