Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6237g00001 ATGAAGCTTTTCGGTTTCCCCTTGATGAAGTCTTCAATGAGTACTGAGGAGTTACCATTTGATGATGGTGGAAAGAGATCATTTCAGTGCCGATACTGTCGTCGCCAATTTCCCAATTCTCAAGCACTGGGAGGCCATCAAAATGCTCACAGGAGGGAACGTGCTAAGCTTGCTCAGTTCAAATATCTTCTCCGTCTTCGACAACATCACCATAACTTCAAACCACCATCAAATGGAGCAACTGCTGCTAGTGCAACAACTGCTTCTGCACCCTCGCCACCTCGTCACCACGATATCGATGTGGATCTCAACCTCACACTTGCTTGCTCCTCACACAAATTCAATAACTGA 351 0.4615 MKLFGFPLMKSSMSTEELPFDDGGKRSFQCRYCRRQFPNSQALGGHQNAHRRERAKLAQFKYLLRLRQHHHNFKPPSNGATAASATTASAPSPPRHHDIDVDLNLTLACSSHKFNN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6237g00001 116 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Mupr6237g00001 116 SUPERFAMILY beta-beta-alpha zinc fingers 24 55 IPR036236 -
Mupr6237g00001 116 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Mupr6237g00001 116 Gene3D Classic Zinc Finger 9 85 - -
Mupr6237g00001 116 MobiDBLite consensus disorder prediction 74 91 - -
Mupr6237g00001 116 PANTHER ZINC FINGER PROTEIN GIS 23 97 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Mupr6237g00001 116 MobiDBLite consensus disorder prediction 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6237g00001 Mupr-Chr6237 637 987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6237g00001 1 96 C2H2 Transcription Factor Family AT1G67030 42.453 3.01e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr6237g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6237g00001 - - gmx:102665791 130.954