Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6234g00003 ATGGGTGAACGTAAAAATGGCAGTGAACAAAAAAAAAGGTTTGCCATTCTTGGCATCTCTTCAATCCTCCTTGTGGCCATGGTGGCTGCAGTTGCTGTTAGTTTAAACAATGGAGGTGAAAGTGATGAAGATGGGCATATCTCTAGTGCACAAAGGAACAACGTAGACATGCTTTGCCAATCAACAGAATACAAAGAAACATGCAAGAAAAGCATCGGGAAAGCATCAACCAAAGACGGAGACGCAAAGGAGCTCATAAAAGCTGCGTTCAATGCCACGGCGGTGGAACTTTTAAATCACATAAACAACTCCACCCTTTATCATGAGTTGGCCAAGGACAACATGACAAGACAAGCTATGGATATTTGTAAGGAGGTATTTGACTATGCGGTTGATGGTATTCACAAATCTTCTGAGACGTTGGACAAGTTTGAATTTAACAAGTTGGGTGACTATGTTTATGACCTCAAGGTTTGGATCATGGGGAGTCTTTCTCACCAGCATACTTGCTTGGATGGTTTTGAGAACACAACCACCAAGGCTGGTGAGACAATGGCTAAGGTTATGAATACCTCTTTGGAGCTTAGTAGCAATGCGTTTGACATGATCAATGCGATCTCTGACATACTCAAGCATCTTAATATAACCACAATTAGTGGCAATAGGAGACTTCTCTCTGAGGAAGGAACACTTGATGGTTTCCCTTCGTGGGTGAGTGAAGGCCAACGACGTCTTCTCCAGTCTGGGCTCGGAAATATTAAGCCCAATGCAGTTGTGGCCAAAGATGGGTCTGGACAATTTAAAACACTCACTGACGCTCTTAAAACTGTTCCCCCTAATAATGCTCAACCTTTTGTCATTTATGTCAAGGCTGGTGTGTACACTGAAATTGTCAATGTGGCCAAGGAGATGACCCATGTCACAATTATTGGAGATGGTCCTACAAATACTAGATTCACTGGCAATTTAAATTACGATGATGGTGTCCAAACTTTCAAAACTGCTACCTTTGCTGTGAATGCTGCTAATTTCATGGCCAAGTATGTTGGATTTGAAAACACGGCAGGGGCTGAAAAACACCAAGCAGTGGCACTTCGAATAACAGCAGACCAAGCTGTGGTTTATAAATGCCAAATGGACGGGTACCAAGACACCCTTTATGCCCAATCCCAACGCCAATTCTACCGTGATTGCATCATCAGTGGCACCGTCGACTTTATCTTTGGAGATGCCGTAGGAATGTTCCAAAACTGCATATTAATTGTGAGAAAACCCTTAGACAACCAACAATGCTTGGTGACAGCCGGTGGTAGAACCAAAATTGATAGCCCTAGTGCCCTTGTGTTCCAAAAATGTCACTTCACAGCGGAACCCCTAGTGGCTAACTTGCAACACAAGATAACATACCTTGGAAGGCCATGGAGAACATACTCTAAGGTGGTGATCATGGACTCTCAAATTGACAATATCTTTTTACCAGAAGGGTACATGGAATGGGAGGGAAGTGCATTTGAGGACACATGTATATATTACGAGTATAATAACAAGGGCCCTGGTGCGGACACATCATTGAGAGTTAAATGGCCAGGTGTTAAGACTATAACCTCTGCTGAAGCAGCTAATTATTATCCTGGGAGGTTCTTTGAACTCGCTGATTCGGCTCAACGTGATGCTTGGATTGTTGATGCTAGGGTACCTTACTCTCTTGGCCCTATGAAAGCCTAA 1725 0.433 MGERKNGSEQKKRFAILGISSILLVAMVAAVAVSLNNGGESDEDGHISSAQRNNVDMLCQSTEYKETCKKSIGKASTKDGDAKELIKAAFNATAVELLNHINNSTLYHELAKDNMTRQAMDICKEVFDYAVDGIHKSSETLDKFEFNKLGDYVYDLKVWIMGSLSHQHTCLDGFENTTTKAGETMAKVMNTSLELSSNAFDMINAISDILKHLNITTISGNRRLLSEEGTLDGFPSWVSEGQRRLLQSGLGNIKPNAVVAKDGSGQFKTLTDALKTVPPNNAQPFVIYVKAGVYTEIVNVAKEMTHVTIIGDGPTNTRFTGNLNYDDGVQTFKTATFAVNAANFMAKYVGFENTAGAEKHQAVALRITADQAVVYKCQMDGYQDTLYAQSQRQFYRDCIISGTVDFIFGDAVGMFQNCILIVRKPLDNQQCLVTAGGRTKIDSPSALVFQKCHFTAEPLVANLQHKITYLGRPWRTYSKVVIMDSQIDNIFLPEGYMEWEGSAFEDTCIYYEYNNKGPGADTSLRVKWPGVKTITSAEAANYYPGRFFELADSAQRDAWIVDARVPYSLGPMKA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6234g00003 574 CDD PMEI-like_3 58 207 - -
Mupr6234g00003 574 Pfam Pectinesterase 256 547 IPR000070 GO:0030599|GO:0042545
Mupr6234g00003 574 Pfam Plant invertase/pectin methylesterase inhibitor 55 201 IPR006501 GO:0004857
Mupr6234g00003 574 Gene3D - 253 572 IPR012334 -
Mupr6234g00003 574 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Mupr6234g00003 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 207 IPR035513 -
Mupr6234g00003 574 SMART PMEI_2 50 202 IPR006501 GO:0004857
Mupr6234g00003 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 207 IPR035513 -
Mupr6234g00003 574 NCBIfam pectinesterase inhibitor domain 41 205 IPR006501 GO:0004857
Mupr6234g00003 574 FunFam Pectinesterase 51 207 - -
Mupr6234g00003 574 FunFam Pectinesterase 4 253 571 - -
Mupr6234g00003 574 PANTHER PECTINESTERASE 21 560 - -
Mupr6234g00003 574 SUPERFAMILY Pectin lyase-like 254 548 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6234g00003 Mupr-Chr6234 32449 35735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6234g00003 6 567 Carbohydrate Esterase AT5G49180 45.122 3.64e-178 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6234g00003 K01051 - gmx:100784682 886.715