Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6231g00005 ATGGCTGAGGAGTTTCATGCTGCTATTTGTGGTGAAAGTTGGTGGAATATTAATTCAACAAGAAGTGTGTTCCCTCTGATGTCATCAACTTGTTCTGTGGCAGCAGCTGATGCAGGAAACTACAGCACATGGCAAAGTACTGATTTCGTGGATTTGAAGGGAACAAGGTCTTGTGCTGAGGAGACTAATAACTTGGTTTCTTCTGATGCATCTTTGAGTTTTCTCGATGCTGAGAAGCCACAGCTGAGTGACTCGGCTAGTGGAACTGGTAGCATCTTGATCGATTCCACCTTGCAAATGATGGGTTTTGGCATGTCATCTTCGACTTCATCGAATTGGAATCAATCTCTATTAGGGAGCGGTTTTCATTCTGTGCTTCAAGAAGAAACAGGCACAGCTGGTGGTTCTTCCCATAATTCACAAATTCAAAAGGATTGGAGTCCAAAGAATTTCTCATCTGCTGGTGGTAACCAAGAGTTTTCCTTGGATCAGCAAAGTCTAAATTCTGTTGTTGCAAGCACTGGATTATCTTGTGGCTTCCCAATTGTTTCAGCTTCCTTTGATTACCCTCCAACATTGATACAAAGCCTATATGACCCTGAGCCTCAACCACAACCACATAACACAGTTTTCACCAACCCCTCCATGTCCTATTCATCTACCGCAAACTATGGGACATGTTCCAATGAACTGTCACCAACCTGGTCCAAAGTCTCTTCCCTTATGAAACCCTCAATGCCAAAACAGCAGCTTAGTGGATTGCACTTTTCCAACAATACTTCTTTCTGGAATGCTTCAGCCGAAGCACTTAATGACATAAGAGCAGGTGTTTTTGCTTCATCACAACCACAATATCAACCTCCAAAGTTTGAAGAGAAACCCAACTGCCCCAATACTCTATTAAACAAGCTCAAGAGAGAAGAATCCTCAGACGCAGCATCAGCAGCTAAGAAAAATTCTTCTGAACCTGCATTCAAGAGGCAAAGAATTGAGACGCCATCCCCATTACCAACTTTTAAGGTTAGGAAAGAAAAGCTGGGGGACCGCATCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACGGACACAGCATCCGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTTCACGACCAAGTCAGTGTTTTGACCACTCCATATATGAAAAATGGAGCTCCCATTCAACACCAGCAGGATTGTGAGAATCTGAAGGAGTCAGAAGGGCCAAAACAAGATTTGAGAAGCCGAGGGCTGTGTTTGGTACCGATTTCAAGCACATTTCCTGTGGCTAATGAGACCACTGTTGATTTCTGGACGCCTACATTTGGAGGTGCACTTATTGGCAGGGAAGAAGAAGGAGAAGAAGACACGATTGGTAAAGAGAAAATTAAAGCTGAAGAGAACAAAAGAGAAAAAAGAAGGAAAGAAAAGGAAGTGACTCTTCAAAGATGGACACGTAAAGGAGAATGA 1479 0.4327 MAEEFHAAICGESWWNINSTRSVFPLMSSTCSVAAADAGNYSTWQSTDFVDLKGTRSCAEETNNLVSSDASLSFLDAEKPQLSDSASGTGSILIDSTLQMMGFGMSSSTSSNWNQSLLGSGFHSVLQEETGTAGGSSHNSQIQKDWSPKNFSSAGGNQEFSLDQQSLNSVVASTGLSCGFPIVSASFDYPPTLIQSLYDPEPQPQPHNTVFTNPSMSYSSTANYGTCSNELSPTWSKVSSLMKPSMPKQQLSGLHFSNNTSFWNASAEALNDIRAGVFASSQPQYQPPKFEEKPNCPNTLLNKLKREESSDAASAAKKNSSEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLTTPYMKNGAPIQHQQDCENLKESEGPKQDLRSRGLCLVPISSTFPVANETTVDFWTPTFGGALIGREEEGEEDTIGKEKIKAEENKREKRRKEKEVTLQRWTRKGE 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6231g00005 492 Coils Coil 461 481 - -
Mupr6231g00005 492 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 340 397 IPR036638 GO:0046983
Mupr6231g00005 492 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 139 431 - -
Mupr6231g00005 492 MobiDBLite consensus disorder prediction 307 333 - -
Mupr6231g00005 492 CDD bHLH_AtbHLH_like 336 386 IPR045239 -
Mupr6231g00005 492 Gene3D - 340 403 IPR036638 GO:0046983
Mupr6231g00005 492 FunFam Transcription factor bHLH123 family 340 402 - -
Mupr6231g00005 492 MobiDBLite consensus disorder prediction 453 492 - -
Mupr6231g00005 492 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 330 379 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6231g00005 Mupr-Chr6231 36647 39173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6231g00005 1 447 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 40.851 3.80e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6231g00005 - - gmx:100794682 686.411