Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6228g00001 ATGGTTAGTGCAATAAAAGCAGCCATTGGGGATTTAGTGTTGACTTTCACGTGGGTCTTCTTTTCTTCCATGTTGGGATTGGCCACCAACTTCATAACAACAGCGCTTGATCTCCATCGCGTGTCTTACAACGGTTTTGATTACCCTAGTGCCATCATCATAACTTCGCTTATCTTTGTCCTCGTTACGATATTCACCTTCATTGGCAATGCCTTGGGCGGTGCAAGCTTCAACCCCACCGGCAACGCTTCCTTCTACGCCGCTGGGCTTGGCTCCGACACCCTTATCTCGATGGCTCTCCGTTTCCCTGCTCAGTTATGGTCCATGTTTCAACTTCCTGTCGCTGTCGCAGTATTGCTGGAAAGTTCTTCCACCGTGATCTCCATTGCAACGTCAAGATTTTTGGACTCTTTGTCATTGGCACTGGGTTCAGTGGGTGGTGTTCTGGCAGTTATGGAGGTTATGCCACCGAAATACAAGCACTTGATTGGAGGGCCTTCTCTGAAGGTTAGCTTGCATACTGGAGCTATTGCAGAAGGGGTGCTGACCTTTGTAATCACCTTTGTTGTTCTCTGCATCATGCTCAGGGGTCCTCGTAGTGAGGCTGCGAAGACTTGGTTGATGGCAATCTCAACTGTTATTGTGATCACTGCTGGTGCGAGTTACACAGGACCAGCAATGAATCCTGCCTTTGTGAGTGATTACTATTCATCTCAATTAATATATAAATTGGTGTTTATTCTGTCTTATCTCCCTGCTTTTCTCTATCCCTAA 774 0.4677 MVSAIKAAIGDLVLTFTWVFFSSMLGLATNFITTALDLHRVSYNGFDYPSAIIITSLIFVLVTIFTFIGNALGGASFNPTGNASFYAAGLGSDTLISMALRFPAQLWSMFQLPVAVAVLLESSSTVISIATSRFLDSLSLALGSVGGVLAVMEVMPPKYKHLIGGPSLKVSLHTGAIAEGVLTFVITFVVLCIMLRGPRSEAAKTWLMAISTVIVITAGASYTGPAMNPAFVSDYYSSQLIYKLVFILSYLPAFLYP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6228g00001 257 SUPERFAMILY Aquaporin-like 3 231 IPR023271 -
Mupr6228g00001 257 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr6228g00001 257 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr6228g00001 257 PRINTS Major intrinsic protein family signature 178 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr6228g00001 257 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr6228g00001 257 Gene3D Glycerol uptake facilitator protein. 1 248 IPR023271 -
Mupr6228g00001 257 PANTHER AQUAPORIN SIP1-1 139 231 IPR044222 GO:0015250
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6228g00001 Mupr-Chr6228 3700 5170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6228g00001 1 247 Major Intrinsic Protein MIP AT3G04090 44.000 7.58e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6228g00001 K09875 - gmx:100803227 336.65