Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6223g00007 ATGGCTCGAAAGAAGATACCGATAAAGAAGATCGACAACATAAACGCGAGGCAGGTAACATTCTCGAAGAGGAGGAAAGGTCTTTTCAAGAAGGCTCAGGAGCTGTCAACTCTTTGTGATGCTGAGATTGCTCTCATAGTCTTTTCCGCCACTAGCAAGCTCTTTGAGTACGCTAGTTCAAGTATATAA 189 0.4339 MARKKIPIKKIDNINARQVTFSKRRKGLFKKAQELSTLCDAEIALIVFSATSKLFEYASSSI 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6223g00007 62 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Mupr6223g00007 62 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mupr6223g00007 62 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Mupr6223g00007 62 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 61 - -
Mupr6223g00007 62 Gene3D - 13 62 IPR036879 GO:0003677|GO:0046983
Mupr6223g00007 62 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mupr6223g00007 62 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mupr6223g00007 62 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mupr6223g00007 62 SUPERFAMILY SRF-like 1 61 IPR036879 GO:0003677|GO:0046983
Mupr6223g00007 62 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6223g00007 Mupr-Chr6223 50154 50620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6223g00007 1 62 MADS-box Gene Family AT2G22540 74.194 3.63e-29 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mupr6223g00007 SRF-TF 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6223g00007 - - gmx:100810422 112.464