Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6220g00002 ATGCAAAGGCTCAACCCACCACCAGATGATGGTGGAACCTTTTCATTAAAACTCCGAAAGAGTGACAATTTTCATATTGGAAGCACACAAGAAATGTCATACATAGGCTTTGTGCGAGATGGTGGGATTAGTCTTGGTCGTATTCGTACACAGGGTACAGTGGAACGACTTTTTCCATCAATGGGCTTCAGCCTGCCTGAGAGGGACAAAGGCTCACTCTTGTTAAAATGCATCATAAGTCATAACTGGGGTGAGGGAGTGCTGCAACGTGAAGAAGGAAGTAAGAGTGAAAGGAGATCCAAGAAGAAAACAATGTCGATGATGAACAACAACAACGTTGATGGACAGTTTGGGGATACCAAGCTGACCAAAGTGTTTGTGGGAGGGCTACCCTGGGAAACTCCCAAAGAGACATTGAGAGATCACTTTGAAAAGTTTGGTGAGATCCTTGAGGCAGTCATCATTTCCGATAAGCTCACAGGCAGATCCAAAGGTTACGGCTTTGTAAGTCAATAA 516 0.4438 MQRLNPPPDDGGTFSLKLRKSDNFHIGSTQEMSYIGFVRDGGISLGRIRTQGTVERLFPSMGFSLPERDKGSLLLKCIISHNWGEGVLQREEGSKSERRSKKKTMSMMNNNNVDGQFGDTKLTKVFVGGLPWETPKETLRDHFEKFGEILEAVIISDKLTGRSKGYGFVSQ 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6220g00002 171 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 125 169 IPR000504 GO:0003723
Mupr6220g00002 171 PANTHER BOULE-RELATED 104 170 - -
Mupr6220g00002 171 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 123 171 IPR000504 GO:0003723
Mupr6220g00002 171 SUPERFAMILY RNA-binding domain, RBD 115 169 IPR035979 GO:0003676
Mupr6220g00002 171 Gene3D - 84 170 IPR012677 -
Mupr6220g00002 171 MobiDBLite consensus disorder prediction 91 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6220g00002 Mupr-Chr6220 7925 9713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6220g00002 119 169 C2H2 Transcription Factor Family AT2G19380 49.020 5.34e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6220g00002 - - twl:119980616 116.316