Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6211g00004 ATGAGTAAATATGTGCGTAGATCTATAAAAAGAGCAGAGAGAAACGTCGTCGCTTCGGAGAAGAAACTGTCGAACCCAATGAGGGAGATAAAGGTGCAGAAGCTCGTCCTCAATATCTCCGTCGGTGAGAGTGGAGATCGTCTCACCAGAGCCGCTAAGGTGTTGGAACAACTCAGTGGGCAAACCCCCGTGTTTTCCAAAGCAAGGTACACTGTTCGTTCCTTTGGGATTAGAAGAAATGAGAAGATAGCATGCTATGTCACTGTCAGAGGTGACAAGGCAATGCAACTTTTGGAGAGTGGTTTGAAGGTGAAGGAATATGAACTTCTCAGAAGGAACTTCAGTGATACTGGCTGTTTTGGCTTTGGTATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCTTCAACTGGTATTTATGGAATGGACTTCTTCGTTGTTCTGGAGCGTCCTGGCTATCGGGTGGGACGTCGCAGAAGGTGCAAGTCCCGGGTTGGAATTCAGCACCGTGTCACAAAGGATGATGCTATGAAGTGGTTCCAGGTGAAATATGAGGGAGTGATCCTTAACAAGTCTCAGGCAATTTTCGATCTTTCTGGGGGTAATATCTTAATTTTGAGGCAGATTTTGAATCGGACATGGATTAACTATAGCCCTGTTAAACAATACTTTTATTGCAAAGAACTTGTGAAGCCCTCTTTATGCAATCATGCTTGGCAACAATTTATTCTGTTTTCCTTGCAACCAAGAAGCCTGTGCAAAACATTTTACTTGCGAGGGCCCTAA 789 0.4398 MSKYVRRSIKRAERNVVASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKDDAMKWFQVKYEGVILNKSQAIFDLSGGNILILRQILNRTWINYSPVKQYFYCKELVKPSLCNHAWQQFILFSLQPRSLCKTFYLRGP 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6211g00004 262 Gene3D - 17 193 IPR022803 -
Mupr6211g00004 262 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 15 192 IPR002132 GO:0003735|GO:0005840|GO:0006412
Mupr6211g00004 262 Pfam Ribosomal protein L5 25 78 IPR031310 -
Mupr6211g00004 262 SUPERFAMILY RL5-like 24 189 IPR022803 -
Mupr6211g00004 262 FunFam 60S ribosomal protein L11 18 190 - -
Mupr6211g00004 262 ProSitePatterns Ribosomal protein L5 signature. 55 71 IPR020929 GO:0003735|GO:0005840|GO:0006412
Mupr6211g00004 262 Pfam ribosomal L5P family C-terminus 82 180 IPR031309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6211g00004 Mupr-Chr6211 33438 35819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6211g00004 17 196 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 95.556 4.17e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6211g00004 K02868 - gmx:100812386 339.347