Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6207g00002 ATGACGCGCGCGCTCAGACTCCTCCAATCCGTGGCGGCGCCACCGCCGGAGCCCGCCGCCGCCGTCGAGTCCGACTTCGTGGTGATCCTTGCGGCGCTCCTCTGCGCCCTCATATGCGTGGTCGGCCTCACTGCCATCGCGCGCTGCGCCTGGCTCCGCCGTGGATCCAGGGCCGGCGCCGGCGAAGTATCGCCGGCGACCGCGCAGGCAAACAAGGGCCTCAAGAAGAAGGTGGTGAACTCGCTGCCAAAGTTCACCTACGGCGACGATGGCAGCCGGTGCAAGTGGTCGGAGTGCGCGATTTGCCTGACGGAGTTCGCCGGCGGCGACGAGGTCCGGGTGCTGCCGCAGTGCGGCCACGGGTTCCACGTGGCGTGCGTGGACACGTGGCTCGCGTCGCACTCGTCGTGCCCCTCGTGCCGTGCGCCCTTCGCCGTGGCGCGCTGCCAGAAGTGTGGGCAGTTCCCGGTGGTGACCGCCGCCGAGTCGGAGTCGAAGTCCGTTGGCGGCGACAATGCGGATAACGGTGGGAATGCTAATCGTAATGTTATCATTACCAATGGGTTTAGTAATTACGGGTTATAA 585 0.6615 MTRALRLLQSVAAPPPEPAAAVESDFVVILAALLCALICVVGLTAIARCAWLRRGSRAGAGEVSPATAQANKGLKKKVVNSLPKFTYGDDGSRCKWSECAICLTEFAGGDEVRVLPQCGHGFHVACVDTWLASHSSCPSCRAPFAVARCQKCGQFPVVTAAESESKSVGGDNADNGGNANRNVIITNGFSNYGL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6207g00002 194 CDD RING-H2_EL5-like 98 141 - -
Mupr6207g00002 194 SMART ring_2 99 140 IPR001841 -
Mupr6207g00002 194 FunFam E3 ubiquitin-protein ligase ATL6 62 147 - -
Mupr6207g00002 194 Pfam Ring finger domain 98 141 IPR001841 -
Mupr6207g00002 194 SUPERFAMILY RING/U-box 98 147 - -
Mupr6207g00002 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 146 IPR013083 -
Mupr6207g00002 194 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Mupr6207g00002 194 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 15 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6207g00002 Mupr-Chr6207 25839 26989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6207g00002 1 152 C3H Transcription Factor Family AT1G20823 60.366 1.51e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6207g00002 - - gmx:100813341 296.589