Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6194g00004 ATGGTCAATCCCAAGACAAGAATTCTCTGTTTCGCCGTTGTCCAACAAGGCCCATTGTGGATTATATTCGAGCGCAACATGATCATTGAGTTGAGGCAGGAGCTCTTGATTTCCTCCAATAAGATCATTGAGGGTCGTGGTGCGAATGTGCAAATCAAGAATGGCGGTGGCCTCACTATGCATGACGCCATCTCCATATTTAGAGCCTCCAATATTTGGATAGATCATGTTTTCCTCTCTGACTCCACCGTTGTCACCATCTCAAATTGTCACATGACTAAACATAATGATGTGATGCTATTTGAGGCCAGATACCAACACCAAGCAATAATGAGCTAA 339 0.4366 MVNPKTRILCFAVVQQGPLWIIFERNMIIELRQELLISSNKIIEGRGANVQIKNGGGLTMHDAISIFRASNIWIDHVFLSDSTVVTISNCHMTKHNDVMLFEARYQHQAIMS 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6194g00004 112 Gene3D - 1 111 IPR012334 -
Mupr6194g00004 112 PANTHER PECTATE LYASE 18-RELATED 1 61 IPR045032 GO:0030570
Mupr6194g00004 112 SUPERFAMILY Pectin lyase-like 9 101 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6194g00004 Mupr-Chr6194 10680 11130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6194g00004 1 107 Polysaccharide Lyase AT1G14420 41.026 8.09e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6194g00004 K01728 - gmx:100785801 123.635