Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6193g00001 ATGTTGGACTACGAATGGGGGAACCCGTCCACAATAATGCTCACCGGAAACGAGGACAACGCCGCCGCGGCCTCCGACCAAGCCCACCGTCAAATCTTCGACCACTACCCGACACACACGCTCATCCCCGACCACTTCCTACACGCGCCCACACACTCCACCGCGGCGGCAACCACCGTGGATTTCACCCACCACCACCACCACTTCAACCCACAACCCCACCACCAGCACCACGCCTTCTTCGACCCACGCGCCTTCCACGGCGCGTCGCCCACCTCCTACAACCCGCCCCCTTCCATGCTCTCGCTAGACCCGCTGCCTCACGTCAACGTAGCCAACTGCGGTCCTGGGCCTGGAACTGGGCCAGGCCCGGGCCTCCTCCTGGTGCCCAAGTCTGAGGATGTCGGCCGGCCCATGGACTTTGTTGGCTCGCGAATTGGACTCAACCTCGGAGGACGGACTTATTTCTCGTCTTCCGAAGATGATTTCGTGAGCCGACTATATCGTCGGTCCAGGCCGGCTGAACCGGGTTCGACCGCTTCGTCTAACTCTCCGCGCTGCCAGGCCGAGGGATGCAATGCTGATCTGTCGCAGGCTAAGCACTACCACCGCCGCCACAAAGTGTGCGAGTTTCACTCCAAAGCCGCCACCGTCATCGCCGCCGGCTTGACCCAGCGATTCTGCCAGCAATGCAGCAGGTTCCATCTTCTTTCTGAGTTTGATAACGGAAAACGTAGCTGCAGGAAGAGATTGGCAGATCATAATCGCCGCAGAAGAAAAACTCAGCAGCCAACTCAAGAAATTCAGAAATCTCAGCCCTCTTTGGATAATGTTGCAAGATCTCCACCGGACTCGGGAGCTCAGTCTTCGTCGGTGACGGTGGCGGTGTCGCCGCCGGATTATTTCCGGCAGAGGCCGTACCAAAGCACAAACCCATCATCGACTTCGAGCTCACTGTTTTTCTCAAGCGGGTAG 975 0.5887 MLDYEWGNPSTIMLTGNEDNAAAASDQAHRQIFDHYPTHTLIPDHFLHAPTHSTAAATTVDFTHHHHHFNPQPHHQHHAFFDPRAFHGASPTSYNPPPSMLSLDPLPHVNVANCGPGPGTGPGPGLLLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAEPGSTASSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPTQEIQKSQPSLDNVARSPPDSGAQSSSVTVAVSPPDYFRQRPYQSTNPSSTSSSLFFSSG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6193g00001 324 MobiDBLite consensus disorder prediction 253 324 - -
Mupr6193g00001 324 FunFam Squamosa promoter-binding-like protein 14 178 248 - -
Mupr6193g00001 324 SUPERFAMILY SBT domain 185 265 IPR036893 GO:0003677|GO:0005634
Mupr6193g00001 324 MobiDBLite consensus disorder prediction 265 324 - -
Mupr6193g00001 324 Gene3D - 177 248 IPR036893 GO:0003677|GO:0005634
Mupr6193g00001 324 Pfam SBP domain 187 260 IPR004333 GO:0003677
Mupr6193g00001 324 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 104 315 IPR044817 GO:0003677
Mupr6193g00001 324 ProSiteProfiles Zinc finger SBP-type profile. 184 261 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6193g00001 Mupr-Chr6193 17988 20236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6193g00001 1 234 SBP-box Gene Family AT1G02065 47.390 4.42e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr6193g00001 SBP 4.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6193g00001 - - gmx:100778566 540.421