Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6175g00001 ATGGAACTGGATGTCTTCGAACTCTACCTCAACCGTGTGCAAGAGTCATCCCTATCCATCCCAGTCGACAGTCCCAATGGTGATCAATTCTACATTTACTTTGAATACGTCCATCACCAAATCACGCCCTCCCCAACCGAACCAGACGCTGAATCCATAACCACAATCAATCGCACACTCTTGGTTCCTCAGACTGCAAGAAATACTACCCCTATTGGCGAATACGCATGGGAAATGGTTGCGGCACACCAAGGGCACAACGTGTGGGAGATGAGAGTTATGCTTCATGTTACCTCGTGGCCCGATGAAGATGATGATGACGATGATGATTACATTGATCTCAATGAGCACCAGTATGTGTTGCAATCAACATCCCAAATTGCAGAATCAACATCCCAAATTGTGGATTTATTGAAGGAAGTCGAAAGCACAGAGCTTCCCTTTTATTCTACAGATCAATGTGCGATTTGTTTGGAAGAGTTTTGCACCGGATCCAAGTTGGAAGTTGTTTCCACGGAATGTTTGCATGTTTTCCATAAAGAATGCATTATTCAGTGGCTCCAGAAATGCACATTTCGTTCATGTCCATTGTGTCGGTGCTTGTTAAAGTCAAAATCAGTTTAA 624 0.4375 MELDVFELYLNRVQESSLSIPVDSPNGDQFYIYFEYVHHQITPSPTEPDAESITTINRTLLVPQTARNTTPIGEYAWEMVAAHQGHNVWEMRVMLHVTSWPDEDDDDDDDYIDLNEHQYVLQSTSQIAESTSQIVDLLKEVESTELPFYSTDQCAICLEEFCTGSKLEVVSTECLHVFHKECIIQWLQKCTFRSCPLCRCLLKSKSV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6175g00001 207 ProSiteProfiles Zinc finger RING-type profile. 154 199 IPR001841 -
Mupr6175g00001 207 Pfam Ring finger domain 152 199 IPR001841 -
Mupr6175g00001 207 SUPERFAMILY RING/U-box 153 204 - -
Mupr6175g00001 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 204 IPR013083 -
Mupr6175g00001 207 SMART ring_2 154 198 IPR001841 -
Mupr6175g00001 207 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 96 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6175g00001 Mupr-Chr6175 6727 7451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6175g00001 90 204 C3H Transcription Factor Family AT3G15740 26.957 2.29e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6175g00001 - - tpra:123896617 100.908