Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6174g00001 ATGGCTGATTCGAAGGTGGAGACGATTGCAAGATTAGCCCAATGGAAAATCGAGAACTTCGGACCCTGCTCCTACAAGAAATCAGACCCTTTCAAGCTCGGAATTTGGAACTGGTACATGTCCATAGAGCGGAACAGGTACCTCTACATTCACATCTTTCCAGAACCTTCTCGGATTTCTAAGGAACAGCCACCTATCGCTCGCTTCATCCTACGTGTCTCCAATAACTCTGGACCTTCCCGCAAATTTTACATTTCCCCTGTTCATGAAAAGGTGCTTAGGACATCTGATGACTTTGTCTGGCCTGTTGATACTACATTCCTTGGTCGCTTCATTATTGATGTTGAATTTCTTGACTTGAAGACGTGCCCTGTGAATGGTGAACAAGCTAGATCTGTATGGCCATCTGATGGAAAACTGCAAACTGTTGCAGCTCAGAGCACCCTTCGATGCCTGTCTCGCATGCTTGATGAGGCTATACACGCTGACCTCACCATTATCACCGCAGATGGAACTCTAAGGGCTCATAAGGCTGTTTTATCGGCAAATTCTACTGTGTTCCATGGCTTGTATCTTCACAATGGTGATGAAAAAGAGACAATTACCATCCACATGGAAGATATGTCACAAGAATCCTGCATGTCCCTTCTGAGTTACTTGTACGGCACTATAAAACAAGAAGATTTCTGGAACCACAGACTTGAATTGCTCGGAGCAGCCAATAAATATGAGCTTGGTGATCTCAAGGATGCCTGTGAGGAAAGCCTGCTGGAAGATCTTAACTCGGGAAATGTTTTGGAAAGGCTAAATGATGCTTGGCTATACCAGTTGCCCAAGCTAAAAAAAGGATGTTTCACATTCTTATTTGATTTTGGGAAGATACATGATGTTAGAGATGAAATAAATACCTTTTTCCGTCATGCAGATAGGGAGCTAATGGTGGAGATGTTTCAGGAAGTGCTTACAATTTGTAAATAG 978 0.4325 MADSKVETIARLAQWKIENFGPCSYKKSDPFKLGIWNWYMSIERNRYLYIHIFPEPSRISKEQPPIARFILRVSNNSGPSRKFYISPVHEKVLRTSDDFVWPVDTTFLGRFIIDVEFLDLKTCPVNGEQARSVWPSDGKLQTVAAQSTLRCLSRMLDEAIHADLTIITADGTLRAHKAVLSANSTVFHGLYLHNGDEKETITIHMEDMSQESCMSLLSYLYGTIKQEDFWNHRLELLGAANKYELGDLKDACEESLLEDLNSGNVLERLNDAWLYQLPKLKKGCFTFLFDFGKIHDVRDEINTFFRHADRELMVEMFQEVLTICK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6174g00001 325 SMART BTB_4 162 260 IPR000210 GO:0005515
Mupr6174g00001 325 Pfam BTB/POZ domain 155 258 IPR000210 GO:0005515
Mupr6174g00001 325 Gene3D Potassium Channel Kv1.1; Chain A 136 289 IPR011333 -
Mupr6174g00001 325 ProSiteProfiles BTB domain profile. 162 221 IPR000210 GO:0005515
Mupr6174g00001 325 SUPERFAMILY POZ domain 145 258 IPR011333 -
Mupr6174g00001 325 PANTHER OS08G0495500 PROTEIN-RELATED 1 324 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6174g00001 Mupr-Chr6174 2079 5888 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr6174g00001 BTB 6.1e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6174g00001 K10523 - gmx:100775687 603.208