Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6172g00002 ATGGAACCTCGTGTTGGGAATAAGTTTCGCCTGGGTCGGAAGATCGGAAGCGGTTCCTTTGGGGAGATCTATTTAGGCACTAATATTCAAACAACCGAAGAGGTCGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTGTATGAGTCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTCAGATGGTTTGGAGTGGAGGGAGATTACAATGTTTTGGTGATGGATCTGCTTGGACCAAGTCTTGAAGATCTATTTAACTTCTGTAGTAGAAAGCTATCACTAAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTCATTCATTCTAAATCATTTCTGCATCGGGATATCAAACCGGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTTGGTTTGGCTAAGAAATACAGAGATAGTTCAACACATCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAGCAAAGCAGAAGAGATGATCTTGAGTCTCTTGGTTATGTTTTGATGTACTTCTTGAGAGGAAGTCTTCCCTGGCAGGGACTTAAAGCGGGAACAAAGAAACAGAAGTACGAGAAAATCAGTGAAAAAAAGGTTTCTACCTCGATTGAAGCGTTGTGTCGAGGTTATCCAACAGAATTTGCGTCTTACTTCCATTACTGCCGATCATTAAGGTTTGATGATAAGCCAGATTATGCTTACCTCAAAAGGATATTTCGTGATCTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGACTGGACCATTTTGAAGTATCAGCAATCACAGCTGGCCACTCCTCCAACTCGGGCCATTGGCCCTAGTGCTGGAACCAGTTCAGGACTGCCCCCAGCTGTTACTAATGCTGATAGGCATACAGGAGGGGAAGAAGGGCGACCTCCTGCCTTGGTTTCAGTGGATTCCTCGAGGCGCAGAATGTCAGGGCCCATTTTAAATACTTTATCAGGTGCCAATGTCTTGGGTCAGTCAAGTGGATCAAGGCGAGTTGCTGTTTCTGGTAGCCGTGATGCATTTGTTGGTACTGAGTCAGATATTCGTACTCGCACTGCCGAGGCTAGCCCTGGAGCAGCACACAGAGGTTTGAGTGGGCAAAGAAGTTCACCTATTGGATCTTCTGATCCCAAGAGAGTTGTTGTATCATCCGGGAGAAATGCTTCTCATGTGAAAAATTATGACACTGCACTTAGGGGCATGGAAGCCTTGATCCTCGACGATGAGTTGACAGCACCGGGTTCAATGAGTCAATGA 1377 0.4394 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTTEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPTRAIGPSAGTSSGLPPAVTNADRHTGGEEGRPPALVSVDSSRRRMSGPILNTLSGANVLGQSSGSRRVAVSGSRDAFVGTESDIRTRTAEASPGAAHRGLSGQRSSPIGSSDPKRVVVSSGRNASHVKNYDTALRGMEALILDDELTAPGSMSQ 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6172g00002 458 PANTHER CASEIN KINASE-RELATED 9 372 - -
Mupr6172g00002 458 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6172g00002 458 CDD STKc_CK1_delta_epsilon 8 282 - -
Mupr6172g00002 458 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6172g00002 458 MobiDBLite consensus disorder prediction 303 322 - -
Mupr6172g00002 458 MobiDBLite consensus disorder prediction 384 427 - -
Mupr6172g00002 458 MobiDBLite consensus disorder prediction 407 427 - -
Mupr6172g00002 458 MobiDBLite consensus disorder prediction 303 345 - -
Mupr6172g00002 458 FunFam Casein kinase I isoform delta-like 1 308 - -
Mupr6172g00002 458 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6172g00002 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mupr6172g00002 458 FunFam Putative Casein kinase I 1 85 - -
Mupr6172g00002 458 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mupr6172g00002 458 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Mupr6172g00002 458 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6172g00002 Mupr-Chr6172 12516 19148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6172g00002 7 223 EF-hand Containing Proteins AT2G17890 26.667 1.77e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mupr6172g00002 Pkinase 2.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6172g00002 K02218 - gmx:100811567 853.203