Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6164g00001 ATGGAGGACAAGATAGAGATTGCAGACAAAAAGGTTCTGGTTGATATTGTAAAATTGGCACAAAAAAGAGGCCTGAAGGGTGCACTGGGAGGCTGGAAAGAATTCTTGAGCAGTCATGACAAAAAGTTTGGGGCAAGTTTGAGTGATCCATCAAAGAGATCCCATGAGGTATTGGCTGCATTTCTAAAGACATTTTCAAAGGAGGAAGATTTGAAGTTTTTTGATAACATCATGCGACATCATTCAAATCAATACATGTTGGAGCAACTGAAAGATAAATCTCATGATTCCCCCGAGCAGGGGTGGATAGTTATAAACCTTAAAAACAAATCCAAGGTGATGAGGTCTACTGCAATGATTGCTGTTGACTGTGAAATGGTTCTCTGTGAAGATGGGACTGAAGCATTAGTTAAAGTCTGTGTGGTAGACCATAATTTAGAGGTCAAACTAAATGAACTTGTAAAACCCAACAGAGAAATTATAGACTACAGAACAGAGATCACTGCTGTTTCTTCTCAAGATCTAGAGGCAGTGACTTGCTCCTTGAGTGATATACAGAAATCCATGAAGAAGTTGTTGTCAAATGGAACCATATTAGTGGGACATAGTTTGCATAATGATCTGCGTGTGCTGAAGCTTGATCATGTCAGAGTGATTGACACTTCATATATCTTCCAATCCTTGGATGGATCTATTAAGAGGAGGCCTTCTTTGAATATTCGGGAAAAGGGTGCACCACATAATTGTCTAGATGATGCATGTGCAGCTATGAATCTTGTTCTTGCGAGGATCAAACATGGGGTTGATAGGGAATTTTCAATTTCATTGGTTCAAGAGCAGGTTCCAGGAAGTGAGATGTCAAAGCTGCTTCTTCACAGGATACCAAACATTGTAAACAATGAAACACTGCATAAAATTGTTCCTGGAGACTTCAAAATAGAACTGAAGCCTTCTTCCAGGAAAGGTCAAGGAGAAAAAAATTATTCTGCCTTTGCTATTTTTAAAAACCCACAAGAGGCAGATGATGCCTATGAAAATGTCCAAGGAAATCAATTAAAGGATACGTATGGACGTCCACAGAAACTTGTAACATTTCGGCTAACTACAGGCATGTCTGTCACTCTATTTGTTCGGAAAATGTCAACCGATGAACCCAATGTCTGGACTCCATCTAAGAGGGCTTTACAAATGGATGAGGCAGTTGATGTTTCCAAGAAAGCAAAGATGGATCCAAAAATTGAAGAGGATGCCCCCACAGGCTCAGGCAAGTGTGACACTGATGCCCAATTGAATGAGATTGAAGCACTGAATCAACGATTGAAGCAAAGTGAATTGGAGATTGAATCATTGAGGGAACAGTTGACACAAAAGGATTTTGAAATTACCATGCTGCATAAAATGGTATCCAATTTAAAAAAGCGAAAGAATGAATCACTCACCTTGAAAGAGTTATTCAAACCTTTCAAGACCAGTGAGGAAGTACATAAGAAAATTTGGGTACGAAGAACTTGA 1512 0.3929 MEDKIEIADKKVLVDIVKLAQKRGLKGALGGWKEFLSSHDKKFGASLSDPSKRSHEVLAAFLKTFSKEEDLKFFDNIMRHHSNQYMLEQLKDKSHDSPEQGWIVINLKNKSKVMRSTAMIAVDCEMVLCEDGTEALVKVCVVDHNLEVKLNELVKPNREIIDYRTEITAVSSQDLEAVTCSLSDIQKSMKKLLSNGTILVGHSLHNDLRVLKLDHVRVIDTSYIFQSLDGSIKRRPSLNIREKGAPHNCLDDACAAMNLVLARIKHGVDREFSISLVQEQVPGSEMSKLLLHRIPNIVNNETLHKIVPGDFKIELKPSSRKGQGEKNYSAFAIFKNPQEADDAYENVQGNQLKDTYGRPQKLVTFRLTTGMSVTLFVRKMSTDEPNVWTPSKRALQMDEAVDVSKKAKMDPKIEEDAPTGSGKCDTDAQLNEIEALNQRLKQSELEIESLREQLTQKDFEITMLHKMVSNLKKRKNESLTLKELFKPFKTSEEVHKKIWVRRT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6164g00001 503 Coils Coil 426 460 - -
Mupr6164g00001 503 Gene3D - 114 278 IPR036397 GO:0003676
Mupr6164g00001 503 MobiDBLite consensus disorder prediction 402 423 - -
Mupr6164g00001 503 FunFam Small RNA degrading nuclease 3 114 278 - -
Mupr6164g00001 503 MobiDBLite consensus disorder prediction 402 421 - -
Mupr6164g00001 503 CDD REX1_like 120 261 IPR034922 -
Mupr6164g00001 503 SMART exoiiiendus 118 269 IPR013520 -
Mupr6164g00001 503 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 13 273 IPR047021 GO:0004527
Mupr6164g00001 503 SUPERFAMILY Ribonuclease H-like 119 265 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6164g00001 Mupr-Chr6164 19050 24294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6164g00001 85 259 C2H2 Transcription Factor Family AT2G48100 28.426 1.34e-10 60.8