Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6156g00002 ATGGTTTCAAGAATGCCTATATTTCTTTGTATCCTTGTCATACTCATATCCATATCTCAATCCAACGCCCAACCAAGTTTCTTACGCCACTACTGTAACAATGACAATGGTAATTACACTGCTAACAGTACCTACCAGAACAACCTCAACACCCTTTTGTCCAACCTCTCTTCCAACACAAATATTGACTATGGCTTCTACAATTTTTCTCATGGCCAAGATAATGATAGAGTAAACGCAATTGGGCTGTGCAGAGGAGATGTTAAGCCAGATGCTTGCCGCAGCTGCTTCAATGATTCCAAAGTCCTTCTCACACAACTGTGTCCAAATCAGAATGAGGCAATTGGGTGGTATGACAACTGCATGTTGCGCTACTCTAACCGCTCAATATTCAACGCCGAGGAAACCTCTCCTGATTTCTGTATGAGAAACCCTCATAATGCAACAGATGTTGATCAATTCAATCAAGTGCTGAGGAACTTGCTAGATAGCCTTGTAAGCAAGGCTTCACTAGGAGACTCCCGGCTTAAGTTTGCTGCAGCAAATGAATCAGGACCAGCCTTTCAAAACATCTATGGTCTTGTGCAGTGTACACCTGACTTGTCAGAACTAGAATGCAGTGCATGCTTGGTTGGGGCTATCTCAGAAATTCCACTATGTTCTGATAGCAAGAAAGGTGGTAGAATTCTGAGGCCCAGTTGTAACTTCAGATATGAGTTATACCCCTTCTATGATGCTAACAATGTTGCAATGGCATCAGCACCAGCACCAAAGGTGTCTCCTCCATCAACTGATACCTTGTCCACAAAAGGAAAGAGCAACACATCTCGAACTGTAATAGAAATAGTTGTGCCAATTACTTCCTTTGGCATACTAGCCATCCTTATCTGCATCTGTTTAAGAATGAGGAGGTCATGGAAACACATTGAAGAATTGACTTGCATATCATTCCCAATTGAAGCTGAAAATGATGATGAAATTACATCAGCGGAGACATTGGAATTGGATTTCGCCACAGTCACGGCTGCTACCAACAACTTTTCTGATGCAAATAAGCTAGGACAAGGAGGATTTGGGCCTGTTTACAAGGGTATGTTCTCCAATGGTCAGGAAGTAGCAGTCAAAAGGTTGTCAAAGAATTCCCTCCAAGGAGACATTGAGTTTAAGAATGAAGTGTTGTTAGTGGCCAAGCTTGAGCACCGAAATCTAGTTAAGCTACTAGGTTTTTGTTTGGAAAGAAGAGAGAGGCTGCTGGTGTATGAATTTGTACCCAATAAAAGCCTTGATTTCTTTATATTTGGTAAGTCAAAACTTTTGGTTGATGGAACTAATATTATATCTTGGCTTCGGTTTGCAGATCAAATCAGACGTGCACAATTGAATTGGGAAAAGCGATACAAAATCATAGGAGGCATTGCTAGAGGCCTTCTTTACCTTCACGAGGATTCACGTTTGAGGATTATTCACCGTGATCTCAAAGCAAGTAACATTCTTTTGGATGCAGAGATGCATCCTAAGATATCAGATTTTGGCATGGCAAGATTATTTGAAGTGGATCAAACTCAGGGCAATACAAATAGAATTGTTGGAACCTAG 1596 0.4123 MVSRMPIFLCILVILISISQSNAQPSFLRHYCNNDNGNYTANSTYQNNLNTLLSNLSSNTNIDYGFYNFSHGQDNDRVNAIGLCRGDVKPDACRSCFNDSKVLLTQLCPNQNEAIGWYDNCMLRYSNRSIFNAEETSPDFCMRNPHNATDVDQFNQVLRNLLDSLVSKASLGDSRLKFAAANESGPAFQNIYGLVQCTPDLSELECSACLVGAISEIPLCSDSKKGGRILRPSCNFRYELYPFYDANNVAMASAPAPKVSPPSTDTLSTKGKSNTSRTVIEIVVPITSFGILAILICICLRMRRSWKHIEELTCISFPIEAENDDEITSAETLELDFATVTAATNNFSDANKLGQGGFGPVYKGMFSNGQEVAVKRLSKNSLQGDIEFKNEVLLVAKLEHRNLVKLLGFCLERRERLLVYEFVPNKSLDFFIFGKSKLLVDGTNIISWLRFADQIRRAQLNWEKRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMHPKISDFGMARLFEVDQTQGNTNRIVGT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6156g00002 531 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Mupr6156g00002 531 Gene3D - 24 129 IPR038408 -
Mupr6156g00002 531 Gene3D - 138 243 IPR038408 -
Mupr6156g00002 531 FunFam Cysteine-rich receptor-like protein kinase 10 311 422 - -
Mupr6156g00002 531 Pfam Salt stress response/antifungal 141 241 IPR002902 -
Mupr6156g00002 531 Pfam Salt stress response/antifungal 32 127 IPR002902 -
Mupr6156g00002 531 SMART serkin_6 347 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6156g00002 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Mupr6156g00002 531 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Mupr6156g00002 531 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 446 531 - -
Mupr6156g00002 531 SUPERFAMILY Protein kinase-like (PK-like) 327 531 IPR011009 -
Mupr6156g00002 531 FunFam Cysteine-rich receptor-like protein kinase 10 138 243 - -
Mupr6156g00002 531 Gene3D Transferase(Phosphotransferase) domain 1 445 531 - -
Mupr6156g00002 531 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 130 - -
Mupr6156g00002 531 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 42 531 - -
Mupr6156g00002 531 Pfam Protein tyrosine and serine/threonine kinase 351 522 IPR001245 GO:0004672|GO:0006468
Mupr6156g00002 531 Gene3D Phosphorylase Kinase; domain 1 315 422 - -
Mupr6156g00002 531 ProSiteProfiles Protein kinase domain profile. 347 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6156g00002 Mupr-Chr6156 4665 7159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6156g00002 2 531 Receptor kinase-like Gene Family AT4G05200 48.237 4.43e-156 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr6156g00002 PK_Tyr_Ser-Thr 1.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6156g00002 - - gmx:113000773 798.89