Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6152g00001 ATGGCTTTGGCAATTCCCAATGGTATGGTGGGAGGAGCTTGGTACAGTATACTTGTTATCTCTTTGACGTGTTTCAACATTGCAATTGCATCAGACGCAGAAGCATACGCTGTTGTTGAAAGTGAGTGGTGGAGTGACTACACTAACCATGCTCCAAGTCGTTGCCAGTGGCCAGGCATTGCATGCAACCATGCTGGAAGCATCACAAACATTTCCTTGCCTCCTGAACTCCAATTGGGTAACAAGTTGGCAAGATTCAACTTCTCTTGCTTCCCAAACCTTGTCCACCTCAATCTTGCTGCACATGGAATCACTGTGAGTATTCCATATGGACTAGGTACTCTTTCCAAACTCACTCATCTTGACTTATCCTCTAATGATATAATGGGAACTATACCATCAGACATATGGAATCTAAGGAATCTTGTCACCCTCAACTTGGCTAGAAACAAGCTTAATGGTTCAATTCCACCTTCTGTGGCTCAGTTGACTAAGATTAACTCTCTCTTTCTTGATAACAATCAGATTAGTGGGATTATCCCTGTGGAGTTAGGAAACCTCAGGAATATGATTCAGTTGAGTTTAAGTAATAATAATTTTATTGGTCCAATACCTGTGGAGATTGGTCTATTGAACAATTTGAAATTTCTGTCCCTCGGTAGCAACAAGTTGAATGGTTCCATACCTTTAGAAATAGGGAATTTGAACAACCTTCTAATTCTCGATCTTAATACTAACAATCTGACTGGTGAAATACCTTCAGTCTTGCATAATCTTACCAATTTGACAGAACTGGACTTGTCCCATAATGGGATTTCTGACATGTTCCCACAAAAGCTTACTCAATTGACCAAACTGAAGTATCTGCGAATTTCAGATAACAAAATTTTTGGTGCAATACCTCCTGACATTGGACAACTGTCTAAACTCTTGGTTCTAGACATGTCAAGAAACATGTTGACCCGAGAAATACCAGCCAGTATTTCTACTTGCTCTAACCTGCAGGAGTTAATTTTGAGCCATAACTATATAACAGGAAACATTCCCTCTCATATTGGTGACCTTGTTTCACTTGTTGTAATTGATTTGAGTCATAACTCAATCGTGGGAGAAATACCTAATGAACTTGGGAGTGTGAAATACACAAGGATCTTGGATCTCAGTTATAATGAATTAACTGGAACCATTCCCAGTTCCCTAGTCTCATTGAGGAGTGTAGACTTGTCCTACAATTCTCTACAGGGTGAAATCCCAGTTGCTCTTCAAAATTCTTTGCCACCTAATGCATTCACTGGCAATGAGGATTTGAATCTTCCAAATAATAGAGACTTGGTATTGGAAATGAAGATTTTCCTTCCTCCCACTGCTTTGCTTGCACTTCTATGCTCTGCATATGTGTTCCACCGCTGGTGTAAGGCTGGGAATTGCATGTCTGTATCGAAAGAAACAAAGAACGGTGACATGTTTTCAATATGGAACTATGATGGCAAAATTGCATACAAAGACATAATTGAAGCAACAGAGGGTTTTGACATCAAATACTGCATAGGAGCTGGTGGTTATGGCAGTGTCTACAAAGCACAGCTACCTAGTGGCAGAGTAGTGGCCTTGAAAAAACTCCACAACTTAGAGGCCAACGAACCAGCAATCCGCAGGATTTTCAAGAATGAAGTTAGAATGTTGACAAAGATAAGGCATAGAAATATTGTGAAGCTCTATGGATTCTGCTTGCACAACAGTTGCATGTTTCTGGTTTTGGAATACATGGAAATGGGAAGTTTATATTGCATTCTCCACAATGACATTGAAGCTGTGGAGTTGGATTGGACCAAGAGGGTCAACATTGTGAAAGGCATAGCACATAGCTTATCATACCTTCACCATGATTGCAAGTCAGCAATTATTCATAGAGATGTAACAACCAAAAATGTTCTCTTGAATTTAGAAATGGAGGCTTGTCTCTCCGACTTTGGCATTGCCAGACTTCTAAACTCTGGTTCCTTCAATCGAACAGTACTTGCTGGCACTTATGGATATATTGCACCAGAACTTGCCTATAGCGATTTTGTGACTAAGAAATGTGATGTCTACAGCTTTGGAGTGGTTGCTCTAGAAATTATCATGGGAAAGCATCCTGGAGAACTTGTTTCCTCATTTATCTCTGAATCTTCACAAGGGATTCTCCTCAAAGATATTTTAGACCCCCGATTAATATCCACAGTCAGTCAACAATCTGCTCAGAGTTTAGCTCTTATAGCAACTCTAGCCTTTGCATGTCTTCATTCTCAGCCAAGGCTTAGACCAACAATGAAAATAGTGAGTGACAAACTTGTCACGGGAAAGCCCCGATTAACCAAACCATTTGAAGAAATTTCCATAAAGCAGATTGTAAATCAGGAATTATAA 2406 0.3994 MALAIPNGMVGGAWYSILVISLTCFNIAIASDAEAYAVVESEWWSDYTNHAPSRCQWPGIACNHAGSITNISLPPELQLGNKLARFNFSCFPNLVHLNLAAHGITVSIPYGLGTLSKLTHLDLSSNDIMGTIPSDIWNLRNLVTLNLARNKLNGSIPPSVAQLTKINSLFLDNNQISGIIPVELGNLRNMIQLSLSNNNFIGPIPVEIGLLNNLKFLSLGSNKLNGSIPLEIGNLNNLLILDLNTNNLTGEIPSVLHNLTNLTELDLSHNGISDMFPQKLTQLTKLKYLRISDNKIFGAIPPDIGQLSKLLVLDMSRNMLTREIPASISTCSNLQELILSHNYITGNIPSHIGDLVSLVVIDLSHNSIVGEIPNELGSVKYTRILDLSYNELTGTIPSSLVSLRSVDLSYNSLQGEIPVALQNSLPPNAFTGNEDLNLPNNRDLVLEMKIFLPPTALLALLCSAYVFHRWCKAGNCMSVSKETKNGDMFSIWNYDGKIAYKDIIEATEGFDIKYCIGAGGYGSVYKAQLPSGRVVALKKLHNLEANEPAIRRIFKNEVRMLTKIRHRNIVKLYGFCLHNSCMFLVLEYMEMGSLYCILHNDIEAVELDWTKRVNIVKGIAHSLSYLHHDCKSAIIHRDVTTKNVLLNLEMEACLSDFGIARLLNSGSFNRTVLAGTYGYIAPELAYSDFVTKKCDVYSFGVVALEIIMGKHPGELVSSFISESSQGILLKDILDPRLISTVSQQSAQSLALIATLAFACLHSQPRLRPTMKIVSDKLVTGKPRLTKPFEEISIKQIVNQEL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6152g00001 801 Gene3D Ribonuclease Inhibitor 235 325 IPR032675 -
Mupr6152g00001 801 ProSiteProfiles Protein kinase domain profile. 510 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6152g00001 801 Pfam Leucine Rich repeat 259 274 IPR001611 GO:0005515
Mupr6152g00001 801 SUPERFAMILY Protein kinase-like (PK-like) 489 774 IPR011009 -
Mupr6152g00001 801 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 202 778 - -
Mupr6152g00001 801 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 202 443 - -
Mupr6152g00001 801 FunFam Nuclear pore complex protein NUP107 31 182 - -
Mupr6152g00001 801 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Mupr6152g00001 801 Pfam Leucine rich repeat 92 152 IPR001611 GO:0005515
Mupr6152g00001 801 SUPERFAMILY RNI-like 96 430 - -
Mupr6152g00001 801 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Mupr6152g00001 801 PRINTS Leucine-rich repeat signature 118 131 - -
Mupr6152g00001 801 PRINTS Leucine-rich repeat signature 259 272 - -
Mupr6152g00001 801 Gene3D Ribonuclease Inhibitor 27 234 IPR032675 -
Mupr6152g00001 801 Gene3D Transferase(Phosphotransferase) domain 1 589 790 - -
Mupr6152g00001 801 SMART LRR_typ_2 139 163 IPR003591 -
Mupr6152g00001 801 SMART LRR_typ_2 307 331 IPR003591 -
Mupr6152g00001 801 SMART LRR_typ_2 355 379 IPR003591 -
Mupr6152g00001 801 SMART LRR_typ_2 400 432 IPR003591 -
Mupr6152g00001 801 SMART LRR_typ_2 259 283 IPR003591 -
Mupr6152g00001 801 SMART LRR_typ_2 211 235 IPR003591 -
Mupr6152g00001 801 SMART LRR_typ_2 115 138 IPR003591 -
Mupr6152g00001 801 FunFam Leucine-rich repeat receptor protein kinase MSP1 474 588 - -
Mupr6152g00001 801 SMART LRR_sd22_2 355 374 - -
Mupr6152g00001 801 SMART LRR_sd22_2 211 237 - -
Mupr6152g00001 801 SMART LRR_sd22_2 163 184 - -
Mupr6152g00001 801 SMART LRR_sd22_2 115 141 - -
Mupr6152g00001 801 SMART LRR_sd22_2 259 285 - -
Mupr6152g00001 801 FunFam Leucine-rich repeat receptor-like protein kinase 589 786 - -
Mupr6152g00001 801 ProSitePatterns Tyrosine protein kinases specific active-site signature. 634 646 IPR008266 GO:0004672|GO:0006468
Mupr6152g00001 801 ProSiteProfiles Leucine-rich repeat profile. 261 282 IPR001611 GO:0005515
Mupr6152g00001 801 Pfam Protein kinase domain 514 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6152g00001 801 Gene3D Phosphorylase Kinase; domain 1 472 588 - -
Mupr6152g00001 801 Gene3D Ribonuclease Inhibitor 326 443 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6152g00001 Mupr-Chr6152 1995 4659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6152g00001 70 682 Receptor kinase-like Gene Family AT4G08850 37.500 1.02e-130 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr6152g00001 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6152g00001 - - gmx:102670020 1202.96