Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6150g00001 ATGGGCCAAAAAATAAGAATTAACTTTTATATAGCAAGCATGGCAGTCACATTCTACAACCTTAGCTCTGCTTCTGGGTTGAAGAAGCTCGATGAGTACCTTCTCTCACACAGTTATATCACTGGGTACCAAGCTTCAAAGGATGATCTTACTGTTTATGCAGCTTTGTCAAAGGTTCCATCGGATGAATATGTGAATGTGTCCAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGCGAGGGATCTGGTGTCACTGTTGAGGGGTCTCTTGTTGCGGAGGCTGTTGCAACTCCACCAGCTGCTGATTCAAAGGCAAGTGCAGCTGCTGCTGAGGAGGATGATGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAGGAAGAGAAGAAGGCAGCCGAGGAACGGGCAGCTGCAGTCAAGGCATCTTCAAAAAAGAAAGAGTCTGGGAAATCCTCTGTTCTATTGGATGTGAAACCATGGGATGATGAAACCGACATGAAGAAGCTTGAAGAATCAGTGAGATCTGTTCATATGGATGGGTTGCTTTGGGCCAAACTTGTTCCTGTTGGGTATGGTATCAAGAAACTGCAAATTATGCTTACTATTGTGGATGACCTAGTTTCTGTCGACAATCTTATTGAGGAATATCTCACAGTTGAGCCCATCAATGAATATGTCCAGAGTTGTGACATTGTTGCCTTCAATAAAATATAA 732 0.4331 MGQKIRINFYIASMAVTFYNLSSASGLKKLDEYLLSHSYITGYQASKDDLTVYAALSKVPSDEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSLVAEAVATPPAADSKASAAAAEEDDDDDVDLFGEETEEEKKAAEERAAAVKASSKKKESGKSSVLLDVKPWDDETDMKKLEESVRSVHMDGLLWAKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEYVQSCDIVAFNKI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6150g00001 243 Pfam EF-1 guanine nucleotide exchange domain 158 243 IPR014038 GO:0003746|GO:0006414
Mupr6150g00001 243 FunFam Elongation factor 1-beta 1 like 150 243 - -
Mupr6150g00001 243 CDD EF1B 159 243 IPR014038 GO:0003746|GO:0006414
Mupr6150g00001 243 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 21 243 - -
Mupr6150g00001 243 Gene3D - 7 91 - -
Mupr6150g00001 243 Coils Coil 128 148 - -
Mupr6150g00001 243 SUPERFAMILY GST C-terminal domain-like 21 80 IPR036282 -
Mupr6150g00001 243 SMART EF1_GNE_2 156 243 IPR014038 GO:0003746|GO:0006414
Mupr6150g00001 243 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 232 243 IPR001326 GO:0003746|GO:0005853|GO:0006414
Mupr6150g00001 243 FunFam Elongation factor 1-delta 1 16 91 - -
Mupr6150g00001 243 Gene3D - 149 243 IPR014717 -
Mupr6150g00001 243 SUPERFAMILY eEF-1beta-like 153 243 IPR036219 -
Mupr6150g00001 243 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 120 128 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6150g00001 Mupr-Chr6150 6878 9039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6150g00001 18 243 Eukaryotic Initiation Factors Gene Family AT2G18110 79.565 4.05e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6150g00001 K03232 - gmx:100777627 320.857