Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6142g00010 ATGGGTCGCAAGGAACATCGAGTTTGCGCGGCCTGCACCCACAACTGTCTATTGTTCCACCAAACAAAACAAACCTCACCTACCTCTTTCTTCAAGGTCATCGCTAAACAAGAATATTTAACAACTTTGTATATCCCTCCTGATTTTAGTTGTACTGTGTCAGACTTAGTTAATAAGAAAATCATTCTTAATGATTCAAGTGGGCAGCATTGGAAGGTAAAAGTATCAAAAGTAAATGGTTCTTTTGCTTTTGAGGAAGGATGGAATGTTTTTTCATTGGATCATGGGCTTAAAGTTGGATATCTTCTGGTATTCAATTACATTAAGGACTTGCACTTTGATGTCAAGATCTATGATATCTCTGCCTGTGAAAAGCTTGATTTTTCTAAAAAAGGAAATCAGAAGAAAAGAAGTAGGGGCAGAAGTGGCTCTCCAGTTAGAGATGATATATTGGTTAGACAAGGTCCCAATGCCTTAGTTGTCTCCCAGCTTCATGTGCCAAAAGTGAAAAGCCAGCAGAACGAGGTTGACTTAGTAGAAACACAAAATAGTAAAGAGGGTGCCCAACTTATGTGCATATCAGAACACTGTGAAGACCCATGTTATTCGACAAGCCTAGAATTTGACCAGAGCCATGGTGTTGATGGGACTATGAAAATTGCAAACAGAGATTCAAAAGTTTCAGATGTTGATTATGGAACCCATATACATCAAAATGATGCAATTGTATGTAAAGATACTATGGTTGAAGCGATATTGGATATTGGAGCAACCTTAGATATATCTGAACTTGAAATGTCTGGAAGAAATAATTCTCCAGGTGAGGCAGACAAAAGCAAGCATGACAAGACTTCTACTTTGGAACTTGAAGAAAAGGAAGAGAAGGAATCCATCATGTTCAACAAGGAAGCTCAAGAGTGCCAATTTGCTGAGGGCTTAGGTACTACAAAGTTTAATGGGATCTCAAATCTCTTAGATGCTCATATTCACAATGTTCCTGTGGACATGACTCCCAAATTGTGCAGTTCCATGGATAAATTGAATGTAACAGGGTTGCCAAAGGAGACTAAGGGAGAGTTGGGTCACTGTTCTGAGTCTTCTGACACGTTTGATCAAGATAATGAGAGTCTCTCTAACAATACAGCCATTCTCTCCTGTGTGGTGCCCAATGATAATATTTACCTTAAATTGCCGAAATGCCTGGCTTTGAGTGGCAGGGTAAAAGTATTCCAGCAAAGGCAGATGGTAGTGTATCTTCGGGATCCAGTGAGGAGATTGTGGCCGGTGTTTTACCATGAGCAACCGCAGTTACCAATACTGGCACATGGATGGTTCGATTTTAGCAGAGCTAATAACATTGAACCAGAAGATGTGTGTATTTTTGAGGCTGAGGTTGAGCCCGAGAGCAAGTCTAAGTCTAAACGTATCTTAGCTGTACGTATAGTCCACAAGTGA 1455 0.4014 MGRKEHRVCAACTHNCLLFHQTKQTSPTSFFKVIAKQEYLTTLYIPPDFSCTVSDLVNKKIILNDSSGQHWKVKVSKVNGSFAFEEGWNVFSLDHGLKVGYLLVFNYIKDLHFDVKIYDISACEKLDFSKKGNQKKRSRGRSGSPVRDDILVRQGPNALVVSQLHVPKVKSQQNEVDLVETQNSKEGAQLMCISEHCEDPCYSTSLEFDQSHGVDGTMKIANRDSKVSDVDYGTHIHQNDAIVCKDTMVEAILDIGATLDISELEMSGRNNSPGEADKSKHDKTSTLELEEKEEKESIMFNKEAQECQFAEGLGTTKFNGISNLLDAHIHNVPVDMTPKLCSSMDKLNVTGLPKETKGELGHCSESSDTFDQDNESLSNNTAILSCVVPNDNIYLKLPKCLALSGRVKVFQQRQMVVYLRDPVRRLWPVFYHEQPQLPILAHGWFDFSRANNIEPEDVCIFEAEVEPESKSKSKRILAVRIVHK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6142g00010 484 Gene3D - 363 484 IPR015300 -
Mupr6142g00010 484 SMART B3_2 383 473 IPR003340 GO:0003677
Mupr6142g00010 484 SMART B3_2 30 121 IPR003340 GO:0003677
Mupr6142g00010 484 ProSiteProfiles B3 DNA-binding domain profile. 380 484 IPR003340 GO:0003677
Mupr6142g00010 484 PANTHER B3 DOMAIN-CONTAINING 23 463 - -
Mupr6142g00010 484 SUPERFAMILY DNA-binding pseudobarrel domain 25 123 IPR015300 -
Mupr6142g00010 484 SUPERFAMILY DNA-binding pseudobarrel domain 394 463 IPR015300 -
Mupr6142g00010 484 Pfam B3 DNA binding domain 30 118 IPR003340 GO:0003677
Mupr6142g00010 484 CDD B3_DNA 416 462 IPR003340 GO:0003677
Mupr6142g00010 484 MobiDBLite consensus disorder prediction 274 294 - -
Mupr6142g00010 484 Gene3D - 21 123 IPR015300 -
Mupr6142g00010 484 ProSiteProfiles B3 DNA-binding domain profile. 28 121 IPR003340 GO:0003677
Mupr6142g00010 484 MobiDBLite consensus disorder prediction 266 294 - -
Mupr6142g00010 484 CDD B3_DNA 29 119 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6142g00010 20 124 B3 DNA Binding Superfamily AT4G01580 29.091 9.01e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr6142g00010 B3 1.2e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6142g00010 - - ccaj:109789322 622.083