Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6142g00006 ATGGCGGCGGCAGCGGTGGCGGAGGCTCGAAGGGCCCCACGGCCGGGCAAGGGAGGGTTCGAGGGCCACGGTCTGAGCGAAGAGGAGGCGCGTGTTCGAGCCATCGCGGAGATCGTGAACTCCATGGTGGATCTCTCTCACCGAGGCCAAAACGTGGACCTCAACGCGCTCAAGTCCGCCGCGTGCCGCAAGTACGGCCTCTCACGCGCCCCCAAGCTCGTGGAAATGATCGCCGCGCTCCCCGACGCCGAACGCGAAACCCTACTCCCCAAGCTCCGTGCCAAGCCCGTCCGAACCGCCTCCGGAATTGCCGTCGTCGCCGTCATGTCCAAGCCCCACCGCTGCCCCCACATTGCCACCACGGGGAACATCTGCGTTTACTGCCCCGGCGGTCCTGACTCTGATTTCGAGTACAGTACTCAGTCTTACACCGGTTACGAACCGACCAGCATGCGTGCAATTCGTGCGAGGTATAATCCTTATGTCCAAGCAAGGAGCAGGATAGATCAGCTTAAGCGTTTGGGTCATAGTGTAGACAAGGTTGAGTTTATCTTAATGGGTGGTACGTTCATGTCACTTCCTGCTGAATACCGTGATTACTTTATAAGAAATCTCCATGATGCTTTGTCTGGACACACATCTGCCAATGTGGAAGAAGCAGTGTCTTACTCTGAGCATAGTGCAACCAAGTGTATTGGCATGACAATTGAAACGAGGCCAGATTATTGTCTTGGGCCACACTTGCGGCAAATGCTTTCTTATGGTTGTACGCGATTGGAAATTGGAGTCCAAAGCACCTATGAGGATGTTGCTCGTGACACTAATAGAGGACACACTGTAGCTGCTGTAGCCGATTGTTTTTGCTTGGCTAAAGATGCTGGTTTCAAGGTTGTTGCGCACATGATGCCTGATCTTCCAAATGTTGGTGTTGAAAGGGACATGGAAAGTTTCCGTGAGTTTTTTGAGAGTCCCTTGTTTAGAGCAGATGGGCTTAAAATATATCCTACACTTGTAATACGTGGAACTGGGCTTTATGAGCTCTGGAAAACTGGGAGGTATAGAAATTATCCACCTGAACAACTTGTGGACATTATAGCAAGGATCCTTGCATTGGTACCCCCATGGACACGTGTTTATAGAGTTCAGCGGGATATTCCCATGCCTCTAGTTACCTCTGGGGTTGAGAAAGGGAATCTGAGGGAACTTGCATTAGCTCGAATGGAAGACCTAGGATTGAAATGTCGTGATGTTCGAACCAGAGAAGCCGGAATCCAGGATATTCACCACCAAATTAAGCCAGAAGAGGTGGAGCTTGTTCGGCGTGATTATATGGCAAATGAGGGTTGGGAAACATTTCTATCATATGAAGATACACGGCAGGATATCCTTGTTGGTTTGTTGCGATTGCGAAAATGTGGCCGCAACACTACTTGTCCAGAGCTTACGGGAAAGTGTTCTATTGTTCGCGAACTCCACGTTTATGGAACTGCTGTACCAGTTCATGGACGAGATGCTGACAAGCTACAACACCAGGGTTATGGTACACTTTTAATGGAGGAGGCAGAGCGTATTGCTTGCAGAGAACACAAATCAACAAAAATAGCCGTAATTTCAGGGGTTGGCACACGCCATTACTACAGGAAACTGGGATATGAGCTTGAAGGGCCTTACATGCCTGAGTTAATGATATGTTTTATATCCAATCACAAGACATTCGTTTGTGCACTGAGGTTCCCTAACGCCCCCACCCCCCAGTGCTCTCTCGGGTAG 1770 0.5011 MAAAAVAEARRAPRPGKGGFEGHGLSEEEARVRAIAEIVNSMVDLSHRGQNVDLNALKSAACRKYGLSRAPKLVEMIAALPDAERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPAEYRDYFIRNLHDALSGHTSANVEEAVSYSEHSATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDMESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYMANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELTGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIACREHKSTKIAVISGVGTRHYYRKLGYELEGPYMPELMICFISNHKTFVCALRFPNAPTPQCSLG 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6142g00006 589 Gene3D - 414 561 - -
Mupr6142g00006 589 SMART MiaB 105 367 IPR006638 GO:0003824|GO:0051536
Mupr6142g00006 589 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 371 557 IPR016181 -
Mupr6142g00006 589 NCBIfam tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 50 559 IPR034687 -
Mupr6142g00006 589 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 21 558 IPR039661 -
Mupr6142g00006 589 ProSiteProfiles Radical SAM core domain profile. 98 388 IPR007197 GO:0003824|GO:0051536
Mupr6142g00006 589 PIRSF HAT_Elp3 21 562 IPR034687 -
Mupr6142g00006 589 Pfam Radical_SAM C-terminal domain 329 408 IPR032432 -
Mupr6142g00006 589 Pfam Acetyltransferase (GNAT) family 415 551 IPR000182 GO:0016747
Mupr6142g00006 589 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 412 573 IPR000182 GO:0016747
Mupr6142g00006 589 CDD Radical_SAM 112 359 - -
Mupr6142g00006 589 Pfam Radical SAM superfamily 123 311 IPR007197 GO:0003824|GO:0051536
Mupr6142g00006 589 SUPERFAMILY Radical SAM enzymes 135 374 - -
Mupr6142g00006 589 SFLD elongater protein-like 53 558 - -
Mupr6142g00006 589 SFLD ELP3-like 53 558 IPR034687 -
Mupr6142g00006 589 MobiDBLite consensus disorder prediction 1 25 - -
Mupr6142g00006 589 FunFam Elongator complex protein 3 411 563 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mupr6142g00006 Radical_SAM 1.1e-17 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6142g00006 K07739 - gmx:100818764 1103.97