Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6138g00002 ATGAATCATCGTCCTATCATCGAAGACCATATGATGCTCTTCTCTCGGCTATACCCCGGTGCAATAACTCAAGTAACTCCTCAACAAGGGGAGAACAAGCCAAGGCGCAGGCGAAATAAAAAGAATAAAGGAGGAGAAAACGGGGCTGTGACCAAGAAGAGAAAACTCACCGCAGAGCAAGTTAGTCTTCTCGAGCAAAATTTCGGCAATGAACATAAACTCGAGTCCGAAAGGAAGGACCAGCTCGCATTGGAGCTTGGTTTGGATCCTCGACAAGTTGCGGTGTGGTTTCAAAATAGACGATGTCGTTGGAAGAACAAAAAATTGGAGGAAGAGTACTCTAACCTTAAGAATGTTCATGAAACCACCATGCTAGAGAAATGCCACCTTGAGGCTGAGGTGTTGAAGCTCGAGGAGCAGCTTTTGGAGGCAAAGAAGGAGATTCAGCGGCTGCTAGAGCGTGGTGAAAGAGCCCCAAGCAACAGCTCCAGTTCCTCAATGGAAGTTGTGAACCCACCATTTCTTGGAGAGTTTAAGGTGGAAGAGTATGATGATAGTGATGTGTTTTACGTTCCAGAGACCCACTACATCAATGGGATGGAGTGGATTAATCTGTACATCTGA 624 0.4599 MNHRPIIEDHMMLFSRLYPGAITQVTPQQGENKPRRRRNKKNKGGENGAVTKKRKLTAEQVSLLEQNFGNEHKLESERKDQLALELGLDPRQVAVWFQNRRCRWKNKKLEEEYSNLKNVHETTMLEKCHLEAEVLKLEEQLLEAKKEIQRLLERGERAPSNSSSSSMEVVNPPFLGEFKVEEYDDSDVFYVPETHYINGMEWINLYI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6138g00002 207 CDD homeodomain 52 108 IPR001356 GO:0003677
Mupr6138g00002 207 SMART HOX_1 50 111 IPR001356 GO:0003677
Mupr6138g00002 207 FunFam homeobox-leucine zipper protein ATHB-40 46 115 - -
Mupr6138g00002 207 Gene3D - 46 115 - -
Mupr6138g00002 207 Coils Coil 99 126 - -
Mupr6138g00002 207 Pfam Homeodomain 52 106 IPR001356 GO:0003677
Mupr6138g00002 207 ProSiteProfiles 'Homeobox' domain profile. 47 107 IPR001356 GO:0003677
Mupr6138g00002 207 MobiDBLite consensus disorder prediction 24 54 - -
Mupr6138g00002 207 Coils Coil 134 158 - -
Mupr6138g00002 207 ProSitePatterns 'Homeobox' domain signature. 82 105 IPR017970 GO:0000981|GO:0006355
Mupr6138g00002 207 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 29 166 IPR045224 GO:0003700
Mupr6138g00002 207 SUPERFAMILY Homeodomain-like 52 115 IPR009057 -
Mupr6138g00002 207 PRINTS Lambda-repressor HTH signature 78 87 IPR000047 GO:0003677
Mupr6138g00002 207 PRINTS Lambda-repressor HTH signature 87 103 IPR000047 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6138g00002 Mupr-Chr6138 17518 18713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6138g00002 1 207 Homeobox Transcription Factor Family AT4G36740 54.795 5.08e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mupr6138g00002 Homeodomain 2.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6138g00002 K09338 - gmx:100803948 311.997