Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6138g00001 ATGGTGCAAGCACGTGGATTCTTCTCACTCTCAGACCCCGAATTCTTCCTCCATCTCTCACTATCATTGATTGACTCCTCAGAGAACACTGAACTTGGGGTAAGTGACAATGGTGCTGCTACAGTAGAGGATGATTTTGTCTTTGATATAGATCCTAGCTTCCTAGTGGATAGCCGAAAACTTATAATAGGCGAAACGATTAGAGAAGGGTCACATTCCATTCTCTACAAAGGATGGTACGAATTCAATCCTGTATCCGTGAAAGTTATTCATCCAATGCAAACATCGGATGCTACTTCTGAATGCAAGGCAAAATTTCAGCGGGAGTTTATTGGCGCCTCTGTGGAACCATCAATGATGATAATTACAGAACTTGTGGAAGGTTTTTCACTTCAGAAATACCTAGAGAGCATTTATCCAAGTACTCTAAGTTTAGAGCAATCCATAAGTTTTGCTTTGGATATTTCTCAAGGTATGGAATATTTGCATGCAAATGGCATTATTCACCGCGATCTGAAGCCTGGTAACCTGCTTCTTCCCAATGACAACATGCAAATTTTACTTGCAAATTTTGAGATAGCTAGAGAGGAGATATCTGGTGAGATGACTTCTGAGACTGGTACATATCGATATATGGCTCCGGAGTTATTCAGCAAAGATCCACTTCCAAAAGGAACAAAGAAATGCTATGACCACAAGGCAGACGTCTACAGCTTTGCAATGGTTCTATGGGCATTAATAAAAAATCGAACTCCATTTAAAGGAAGGAGTGAGTTGATGGCAGCATATGCTACTGCACGAAACATGAGGCCTTGTGTGGAAGAGTTTCCAAAAGATCTACTTCCCCTTTTGCAGTCATGTTGGGAAGAAGACTCAAAGCTCCGACCAGAATTCTCAGAGATCACTCAAATCCTTGCAAGACTTCTTCAGAACTGCCGCTCAATAGGGACAACACCTAAGGAAGAAGAGTGTTCAACTACAAGTGTGCAGGCACCTATCACTGATTTTGTTGAAGACAACTCCAAACAAGTACAAGAGACTCAGAATCAGAATACCAATGTCTGCACAATGGAACAATCTCAGAGCATAGCACAGACCCCTAGTCCAGTCTTACCCCAAAGCAAGCCTAAAATAACTCTTGGAAAGTGCAAGTGTTTATGGTTATATTTGCGCAAATGCTTTGGCATTTCTTGA 1194 0.4146 MVQARGFFSLSDPEFFLHLSLSLIDSSENTELGVSDNGAATVEDDFVFDIDPSFLVDSRKLIIGETIREGSHSILYKGWYEFNPVSVKVIHPMQTSDATSECKAKFQREFIGASVEPSMMIITELVEGFSLQKYLESIYPSTLSLEQSISFALDISQGMEYLHANGIIHRDLKPGNLLLPNDNMQILLANFEIAREEISGEMTSETGTYRYMAPELFSKDPLPKGTKKCYDHKADVYSFAMVLWALIKNRTPFKGRSELMAAYATARNMRPCVEEFPKDLLPLLQSCWEEDSKLRPEFSEITQILARLLQNCRSIGTTPKEEECSTTSVQAPITDFVEDNSKQVQETQNQNTNVCTMEQSQSIAQTPSPVLPQSKPKITLGKCKCLWLYLRKCFGIS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6138g00001 397 SMART serkin_6 61 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6138g00001 397 PRINTS Tyrosine kinase catalytic domain signature 234 256 IPR001245 GO:0004672|GO:0006468
Mupr6138g00001 397 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672|GO:0006468
Mupr6138g00001 397 PRINTS Tyrosine kinase catalytic domain signature 161 179 IPR001245 GO:0004672|GO:0006468
Mupr6138g00001 397 PRINTS Tyrosine kinase catalytic domain signature 123 136 IPR001245 GO:0004672|GO:0006468
Mupr6138g00001 397 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 58 310 - -
Mupr6138g00001 397 ProSiteProfiles Protein kinase domain profile. 61 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6138g00001 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Mupr6138g00001 397 SUPERFAMILY Protein kinase-like (PK-like) 58 317 IPR011009 -
Mupr6138g00001 397 Gene3D Transferase(Phosphotransferase) domain 1 52 352 - -
Mupr6138g00001 397 Pfam Protein tyrosine and serine/threonine kinase 109 305 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6138g00001 Mupr-Chr6138 1379 8265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6138g00001 44 314 MAP Kinase Kinase Kinase AT5G66710 52.448 1.99e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mupr6138g00001 PK_Tyr_Ser-Thr 1.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6138g00001 - K04427 gsj:114390113 597.816