Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6127g00001 ATGTCGCCCACCCTCATGGCAAATCAAAACCAACGAGAGTCTGCTGAATGTCTGACTTGGCTTTGCTTTTGCTTATCACACTCTCTCTCTTTTTTGTTTCATTCATTGCAAGATATGGGAACATTAGAACTAATTGATGCTCCTCAAACACAATCATCCTCATCCTCATCTTCTTCCATTGATAGCAACAACCACCCTTCAAGGACACCACCACCCTCTTCCCCTTCATCAAGTGTCTGCAGAAACAGAACTGATTTGAGCACTGACCTCAGACTTGGTCTTAGCATCTCTCCTTCTTCTCAATCTGAATCTCCCTTCAATTACACTCCAAGGGAGGAAAGTTTTGATTGGCCACCAATTAAGTCCATATTGAGGAGCAGCCTTGTGGGGAAACAAAGCCATCTGAGCCAAAGACCTTCTTTATTTGTCAAGGTCTACATGGAAGGCATCCCCATCGGAAGAAAATTGAATCTGATGGCACATTATAACTATGATGGACTTGTGAAAACTCTTGGCCATATGTTTAGGACCACCATTGTCTGTCCTAACTCTCAACCACTTAATTCTGGGAATTTTCACGTGCTAACTTATGAGGATCAAGAAGGGGACTGGATGATGGTTGGAGATGTGCCTTGGGAGATGTTCTTGAACAGTGTGAAGAGGCTGAAGATCACAAGAGCTGACAGATGCTAG 693 0.4358 MSPTLMANQNQRESAECLTWLCFCLSHSLSFLFHSLQDMGTLELIDAPQTQSSSSSSSSIDSNNHPSRTPPPSSPSSSVCRNRTDLSTDLRLGLSISPSSQSESPFNYTPREESFDWPPIKSILRSSLVGKQSHLSQRPSLFVKVYMEGIPIGRKLNLMAHYNYDGLVKTLGHMFRTTIVCPNSQPLNSGNFHVLTYEDQEGDWMMVGDVPWEMFLNSVKRLKITRADRC 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6127g00001 230 Gene3D - 134 230 - -
Mupr6127g00001 230 Pfam AUX/IAA family 109 226 IPR033389 -
Mupr6127g00001 230 SUPERFAMILY CAD & PB1 domains 133 224 - -
Mupr6127g00001 230 ProSiteProfiles PB1 domain profile. 140 229 IPR000270 GO:0005515
Mupr6127g00001 230 MobiDBLite consensus disorder prediction 47 67 - -
Mupr6127g00001 230 MobiDBLite consensus disorder prediction 47 113 - -
Mupr6127g00001 230 MobiDBLite consensus disorder prediction 74 109 - -
Mupr6127g00001 230 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 86 228 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6127g00001 Mupr-Chr6127 4295 5520 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6127g00001 144 224 B3 DNA Binding Superfamily AT4G23980 38.272 5.30e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr6127g00001 AUX_IAA 7.5e-32 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6127g00001 K14484 - gmx:100527448 355.91