Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6123g00002 ATGGCCCTGTCAAGTCCACAGATACAGAGATTCCTCTTATGCAAGTTCCGTAGCCGGTCCAGCGCCAAGAACACACGCAGAAACGGGTTTAGCAGGAGCGCGAGCAGAAGGCGGTGGTGCTCTGCCATAGCCATTGATGCTCCCTCGTCTTTGACTGAGGTGCCCGGTATAAGATGGGGATCCATAGCGTTGCAGGGTCTCCGCGAAGAGATGGAGGATGATGTTATTGTTCGACCCGATGGCCTTCAGGGCTTCTCTTTCGCAGCTGTCTTTGATGGCCATGGAGGCTTTTCTTCCGTCCAGTTCCTCAGTGCCAACTATAGGGATGAGCTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGGTTACTGTTAGTTGAGAAAGATTTCAAAGCCATTAAAGGGACATTGCAGGAGGCATTTCTCAAAGTTGACACGAGGCTTGAAATGAATGGAGAGAAGGATGAATCTGGTGCTACAGCAACTGCCGTGTTCATTGGAGACGATAAGCTGCTAATTTCACACATTGGTGACTCATCTGTGGTTCTAAGCAGATCTGGAAAAGCAGAATTGCTGACTAGCCCTCACCGTCCATATGGGAGCAACAAGACTTCTCTTGAAGAAATTAAGAGAATCAGGGAAGCAGGTGGATGGATTAGCAATGGAAGAGTTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGATGTGCGATTCAAGACAAAGAAGAATGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAGATGGTCAGCAAAGTTTGTTTCTCGTGTACAGCTCAACAATGATTTGATTGTTGCATACCCTGATATTTATCAAGTAGCTCTTGGCTCAGATGCAGAATTTATAGTATTAGCATCCGATGGCTTATGGGATTACATGAGCAGCTCAGAAGCAGTTTCTTTAGTGAGGGATCAACTACGAAAACACGGAAACATTCAGCAAGCATGTGAAGCACTTGCAGAAGCCGCTTTGGACCGACGTACACAGGATAATGTCAGCATTATAATTGCCGATTTAGGGAGGACAGACTGGCAGAATGTGCCACTGCAACGACAAAATGTTATATTTGAGCTGGTCCAAGCTCTTGTTACCATTGGAATTGTGTCTATTGGAATCTGGTTTTCATCACAGCTTTCTTTGTAG 1164 0.4605 MALSSPQIQRFLLCKFRSRSSAKNTRRNGFSRSASRRRWCSAIAIDAPSSLTEVPGIRWGSIALQGLREEMEDDVIVRPDGLQGFSFAAVFDGHGGFSSVQFLSANYRDELYKECVEALQGGLLLVEKDFKAIKGTLQEAFLKVDTRLEMNGEKDESGATATAVFIGDDKLLISHIGDSSVVLSRSGKAELLTSPHRPYGSNKTSLEEIKRIREAGGWISNGRVCGDIAVSRAFGDVRFKTKKNEMLQKGVQEGRWSAKFVSRVQLNNDLIVAYPDIYQVALGSDAEFIVLASDGLWDYMSSSEAVSLVRDQLRKHGNIQQACEALAEAALDRRTQDNVSIIIADLGRTDWQNVPLQRQNVIFELVQALVTIGIVSIGIWFSSQLSL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6123g00002 387 Gene3D - 57 353 IPR036457 -
Mupr6123g00002 387 SMART PP2C_4 48 344 IPR001932 -
Mupr6123g00002 387 CDD PP2Cc 57 346 IPR001932 -
Mupr6123g00002 387 PANTHER PROTEIN PHOSPHATASE 2C 38 344 IPR015655 GO:0004722|GO:0006470
Mupr6123g00002 387 Pfam Protein phosphatase 2C 60 339 IPR001932 -
Mupr6123g00002 387 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Mupr6123g00002 387 ProSiteProfiles PPM-type phosphatase domain profile. 58 346 IPR001932 -
Mupr6123g00002 387 SUPERFAMILY PP2C-like 50 347 IPR036457 -
Mupr6123g00002 387 FunFam Protein phosphatase 2C 57 57 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6123g00002 Mupr-Chr6123 7274 11816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6123g00002 1 323 PP2C-type Phosphatase Gene Family AT4G27800 59.878 1.75e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6123g00002 K04457 - gmx:100784071 654.44