Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6118g00001 ATGGCTGCGGGGAGACATGGCGGCTACCGCGAAAACGAATTCAGGGAGCGCGAATCTAAATTGGAAGTTTCCAGGCGCGGATTCGAGAATTCGAAGGAGGATTATGATCGTGTTAGGAATGGTGGCAGTGATGTTGTGAGGGGTGGGGCAAGGGACAGGGTTAGGGTGAGGCAGAAGGATATTAAGGAGAGGGAAGGTGTTAATGGTGGTTACAGATCCTCTTCGAGTCGGAGTGACTCTGGGAGCAGTGGCCTTGGTCCTCGCCGGTGTGGGTTTTATGCCAAGGCAATGGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGTTCTGATGATGCTATTGAATCAGAATCGGGAGTGAAGGAATCTGAGGTAGCCACCATGCAAGAGAACAGGACTCGGTCGCCGCCGGCCGCGGAGAGGAAAAGGAAATTTTCGCCCATAGTGTGGGATGATGACAAGGAAGTCAACGAGTCATCCAAAGTTAGGGTTTCTGCCTCTGTGGTGACGGTGGGGCTTCCTCCTCCACCTCCGTTGCCAAAAGTGTTCCGACAGTCGCAGTCGCCCAATGCTCAGTATGGTGGGGTTGAAATACATCCCGTCAAGAACAGGAATGCTGAGGATCTTCAGTTGAATGCAGCATCGAAGATTACCTTGCCCTCTCCTTCAGGTTTGCATTCCCCGGCACCGAAAGGGAGCTGGGGCAATGATCAGGAAGCTGAGCATGCAGAAGGTGAAGATTATGTTCCAACTCGCAATATATCATCTTCAAGATGGGCAGCTGGGGATAACTCTCCTGGTGATGAGGGTGAGATCCTCAATGACGAGGAAATGCCCAAAAGGAGGAGGGTGTCTCCTGAGTTATTGGATGGTAGACTAAGGAACAAGTTATTGAGTCCTCTGGAATCTAAGATAGAAGGTATTGAAGGAGCTAGAGCCAGATCATCTGAGTCTGAAGAAAGAGGTTTCCATGGGAGAACATCCAGTGGTGATGGTATTGAGTCTGAGAAGGGTGACTACATGGAGATTGATGCTCAAGGTGGGAAAAGTGAAACCAGTGTTAGTCACTCAGACACTGATTCTGAAGATGAAGATGATGGCCGGGAGACTCCAGAACCTGCAGCTCCACCACAAAGAGCAGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGGACATATGGTGTTGTATATAGGGCTAAGGATAAAAAGACTGGAGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAAGAGGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTAGACGTTAAGGAAGTAGTGGTAGGAAGTAGCCTTGATAGCATTTTCATGGTCATGGAATATATGGAACATGATCTTAAAGGACTAATGGAGGCAATGAAGCAACCTTTTAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACTTCAAACCTGCTTCTAAATAACAGGGGTGAGCTCAAAATTTGTGATTTTGGTTTGGCTCGTCAGTATGGGAGTCCTTTAAAACCGTATACACACCTGGTGGTTACACTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCCATTGACATGTGGTCTTTAGGTTGTATAATGGCCGAGTTATTGTCTAAGGAACCGCTGTTTAATGGGAAAACAGAATTTGATCAGCTTGACAAGATTTTCCGGATTCTTGGCACACCAAATGAAACAATCTGGCCTGGATTCTCAAAACTACCTGGAGTCAAGGTCAATTTTGTCAAACACCAGTACAACCTCCTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCTGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGATCCTGAAAAGCGGATCACTGCTGAAGCTGCTCTCAATCATGAGTGGTTCCGTGAAGTTCCTCTTCCCAAGAGTAAAGAATTCATGCCTACATTTCCTGCTCAACATGCACAGGACAGGCGCCTGCGGAGAATATACAAGAGTCCGGATCCTTTAGAGGAGCAACGCCGGAAGGAGTTGCAGCAGGGTGAATCAGGGACTGGTGGAATTTTTGGCTAA 2220 0.4667 MAAGRHGGYRENEFRERESKLEVSRRGFENSKEDYDRVRNGGSDVVRGGARDRVRVRQKDIKEREGVNGGYRSSSSRSDSGSSGLGPRRCGFYAKAMDREPGELSSESGSDDAIESESGVKESEVATMQENRTRSPPAAERKRKFSPIVWDDDKEVNESSKVRVSASVVTVGLPPPPPLPKVFRQSQSPNAQYGGVEIHPVKNRNAEDLQLNAASKITLPSPSGLHSPAPKGSWGNDQEAEHAEGEDYVPTRNISSSRWAAGDNSPGDEGEILNDEEMPKRRRVSPELLDGRLRNKLLSPLESKIEGIEGARARSSESEERGFHGRTSSGDGIESEKGDYMEIDAQGGKSETSVSHSDTDSEDEDDGRETPEPAAPPQRAVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRLRRIYKSPDPLEEQRRKELQQGESGTGGIFG 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6118g00001 739 SMART serkin_6 393 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6118g00001 739 MobiDBLite consensus disorder prediction 8 67 - -
Mupr6118g00001 739 MobiDBLite consensus disorder prediction 273 290 - -
Mupr6118g00001 739 Pfam Protein kinase domain 393 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6118g00001 739 CDD STKc_CDC2L1 387 684 IPR045267 GO:0004674|GO:0005524|GO:0006468
Mupr6118g00001 739 Gene3D Transferase(Phosphotransferase) domain 1 476 715 - -
Mupr6118g00001 739 MobiDBLite consensus disorder prediction 69 83 - -
Mupr6118g00001 739 ProSiteProfiles Protein kinase domain profile. 393 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr6118g00001 739 MobiDBLite consensus disorder prediction 714 739 - -
Mupr6118g00001 739 FunFam Cyclin-dependent kinase G-2 476 715 - -
Mupr6118g00001 739 PANTHER CELL DIVISION PROTEIN KINASE 391 690 - -
Mupr6118g00001 739 MobiDBLite consensus disorder prediction 170 379 - -
Mupr6118g00001 739 MobiDBLite consensus disorder prediction 714 728 - -
Mupr6118g00001 739 MobiDBLite consensus disorder prediction 1 147 - -
Mupr6118g00001 739 Gene3D Phosphorylase Kinase; domain 1 378 475 - -
Mupr6118g00001 739 MobiDBLite consensus disorder prediction 208 222 - -
Mupr6118g00001 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Mupr6118g00001 739 SUPERFAMILY Protein kinase-like (PK-like) 385 690 IPR011009 -
Mupr6118g00001 739 MobiDBLite consensus disorder prediction 307 344 - -
Mupr6118g00001 739 FunFam cyclin-dependent kinase G-2 isoform X1 378 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6118g00001 Mupr-Chr6118 7129 10791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6118g00001 384 729 Core Cell Cycle Gene Families AT5G10270 45.580 3.87e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Mupr6118g00001 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6118g00001 K08818 - gmx:100792524 1294.26