Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6111g00001 GAAGTTGCTCCTCCTGACAATGAGTTTGAGAAGCGCATGAGAGCAGAGGTTGTGCCTGCAAATGAGATAGGGGTAACATTTGAAGATATTGGTGCATTGGATGATATTAAGGAATTACTTCAAGATGTGGTCATGCTTCCCCTCAGAAGACCAGATTTATTTAAAAAAGGTGGGCTTGTGAAGCCTTATAAAGGTATATTGCTTTTTGGGCCACCTGGCACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTCTCAATATCTAACATCACTTCAAAATGGTTTGGAGATGATGAAAAGAATGTTCGAGCTCTGTTTTCGCTAGCAGCAAAGGTTGCTCCAACTATTATTTTCATTGATGAGGTTGATTGCATGCTTGGGCAGCGTACTAAATGGGGAGAGCATGAGGCAATGAGAAAGATTAAAAATGAATTCATGGCCCACTGGGATGGGCTATTGTCAAAACCTGGTGAGCGAATTCTGGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCTATTATTCGACGGTTTGAGCGCAGGATCATGGTTGGTCTTCCATCTGCTGAGAACAGGGAAATGATCTTGAAAACACTCTTAGCTAAGGAAAAATGTGAAAATATAGACTTCAAAGAGCTTTCAACCATGACAGAAGGATATAGTGGAAGTGATCTTAAGAATTTGTGCATGGCTGCTGCTTATCGACCTGTTAGAGAGCTATTACAACAGGAGAGGTTGAGTGAAAAGCAAAAGAAGAAAATGAAGGCAGAAGTTCAAAGCTCAAAAGATGCTTCTGATGCTAAAGAAGAAAAGAAGAAAACGGAGGCAGAAGTTCAGAGCTCAGAAGATGCTTCTGCTGCTAAAGAAGATAAAGAAGACCAAGTTATTACTTTGAGGCCTTTAAACATGGAAGACATGAGACAGGCAAAGAGTCAGGTGGCTGCAAGTTTTGCTGCAGAAGGATCCATGATGAGTGAGCTGAAGGAGTGGAATGATTTGTTTGGAGAAGGAGAGAAGATGTCAAGCCCTTTAGAGAGATACCAAAAACTTGGGCTAAGAGAGTCTCTACCAAAAACCTACAGATACCCAATTGCGTGCAAAGAGCTAAGCTTGATCCTCAGAGAAGCTTTTCATCAATTTCCCAAATATTTGCAATCAATCATCTTCCAAGATATCCTCTCTGCCTTTCGTCTCCTCCCAGAAATACAAGCTCAGAGTGCTGTTTCAGCAGCTCACTTCCTCCTTCAGAGTGTAGAAGCAGCACTACCAAAGCAAAAAAAGAATGTGGCTGTAAAAGAATTTAAGCATGCAATGGTTGCTCATAAGAGGCGCTGTAAAGCTCACCAGGTAGAGAAAGGTTCATTGCAACTGCCACAAGATGTTCTTGTGCACATTTTCAGTTTTCTTGATATGAAATCTTTGGTTTCAGTGGGGCTATATGTTGCACTGTACGGCAATGGTTCTAAAAAGAAGCCTGTGATACTGGTCGAAGGCAAGAATGATAGGCTTTTGCAGGAACCCATACATACTAGAATCATTACTGACTGGAAAGAGGCTGTTAAAGGAGCATACACTAGAACATTATCTAGGAAATTAACAACCAACCGGGGATATTGTGGACACTGCAAATCAATAGTTTGGCTAAATAACGCAAAATGCCCCAATGTACACATTGGAATATCTGAAATTGAAGATATCAAGCCTGTAACAGCATTCCAGGTTGTGGAATATCTTCTAGATGATTATCTATCCATAACATCTTCCTCGGATAGTGACAGTGATTCAGAAGAAGGACCGATTTCTAGGTTATGGGCATATCCCAAGCATATAAGAAAATAA 1872 0.4092 EVAPPDNEFEKRMRAEVVPANEIGVTFEDIGALDDIKELLQDVVMLPLRRPDLFKKGGLVKPYKGILLFGPPGTGKTMLAKAIANEAGASFINVSISNITSKWFGDDEKNVRALFSLAAKVAPTIIFIDEVDCMLGQRTKWGEHEAMRKIKNEFMAHWDGLLSKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKCENIDFKELSTMTEGYSGSDLKNLCMAAAYRPVRELLQQERLSEKQKKKMKAEVQSSKDASDAKEEKKKTEAEVQSSEDASAAKEDKEDQVITLRPLNMEDMRQAKSQVAASFAAEGSMMSELKEWNDLFGEGEKMSSPLERYQKLGLRESLPKTYRYPIACKELSLILREAFHQFPKYLQSIIFQDILSAFRLLPEIQAQSAVSAAHFLLQSVEAALPKQKKNVAVKEFKHAMVAHKRRCKAHQVEKGSLQLPQDVLVHIFSFLDMKSLVSVGLYVALYGNGSKKKPVILVEGKNDRLLQEPIHTRIITDWKEAVKGAYTRTLSRKLTTNRGYCGHCKSIVWLNNAKCPNVHIGISEIEDIKPVTAFQVVEYLLDDYLSITSSSDSDSDSEEGPISRLWAYPKHIRK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6111g00001 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 251 IPR027417 -
Mupr6111g00001 623 ProSitePatterns AAA-protein family signature. 169 188 IPR003960 GO:0005524|GO:0016887
Mupr6111g00001 623 Pfam ATPase family associated with various cellular activities (AAA) 66 196 IPR003959 GO:0005524|GO:0016887
Mupr6111g00001 623 Gene3D - 24 292 IPR027417 -
Mupr6111g00001 623 Pfam AAA+ lid domain 218 254 IPR041569 -
Mupr6111g00001 623 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 5 351 - -
Mupr6111g00001 623 SMART AAA_5 62 199 IPR003593 GO:0016887
Mupr6111g00001 623 SUPERFAMILY F-box domain 466 489 IPR036047 GO:0005515
Mupr6111g00001 623 MobiDBLite consensus disorder prediction 257 306 - -
Mupr6111g00001 623 CDD F-box_SF 466 490 - -
Mupr6111g00001 623 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 24 204 - -
Mupr6111g00001 623 Gene3D - 198 283 - -
Mupr6111g00001 623 Coils Coil 248 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6111g00001 Mupr-Chr6111 275 7849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6111g00001 25 273 Calmodulin-binding Proteins AT3G56690 37.945 1.90e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6111g00001 - - gmx:121172906 584.334